Difference between revisions of "RXN66-83"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATP_3h_tm ATP_3h_tm] == * direction: ** LEFT-TO-RIGHT * common name: ** ADP/ATP transporter, mitoch...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] == * direction: ** LEFT-TO-RIGHT * common name: ** methylmalonate-semialdehyde...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATP_3h_tm ATP_3h_tm] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ADP/ATP transporter, mitochondrial
+
** methylmalonate-semialdehyde_dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.2.1.27 EC-1.2.1.27]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ADP]][m] '''+''' 3.0 [[PROTON]][m] '''+''' 1.0 [[ATP]][c] '''=>''' 1.0 [[ADP]][c] '''+''' 1.0 [[ATP]][m] '''+''' 3.0 [[PROTON]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CH3-MALONATE-S-ALD]][c] '''=>''' 1 [[PROPIONYL-COA]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ADP[m] '''+''' 3.0 H+[m] '''+''' 1.0 ATP[c] '''=>''' 1.0 ADP[c] '''+''' 1.0 ATP[m] '''+''' 3.0 H+[c]
+
** 1 coenzyme A[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 (S)-methylmalonate-semialdehyde[c] '''=>''' 1 propanoyl-CoA[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2553]]
+
* [[Tiso_gene_11323]]
−
** [[pantograph]]-[[creinhardtii]]
+
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20804 20804]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00935 R00935]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ADP/ATP transporter, mitochondrial}}
+
{{#set: common name=methylmalonate-semialdehyde_dehydrogenase}}
−
{{#set: gene associated=Tiso_gene_2553}}
+
{{#set: ec number=EC-1.2.1.27}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Tiso_gene_11323}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=VALDEG-PWY}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 00:07, 19 March 2018

Reaction RXN-11213

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methylmalonate-semialdehyde_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 NAD+[c] + 1 H2O[c] + 1 (S)-methylmalonate-semialdehyde[c] => 1 propanoyl-CoA[c] + 1 hydrogencarbonate[c] + 1 H+[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALDEG-PWY, L-valine degradation I: VALDEG-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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