Difference between revisions of "RIBONUCLEOSIDE-DIP-REDUCTI-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYCLOARTENOL-SYNTHASE-RXN CYCLOARTENOL-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tubulin-tyrosine_liga...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYCLOARTENOL-SYNTHASE-RXN CYCLOARTENOL-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** tubulin-tyrosine_ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.4.99.8 EC-5.4.99.8]
+
** [http://enzyme.expasy.org/EC/6.3.2.25 EC-6.3.2.25]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[EPOXYSQUALENE]][c] '''=>''' 1 [[CYCLOARTENOL]][c]
+
** 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Detyrosinated-alpha--tubulins]][c] '''=>''' 1 [[Alpha-tubulins]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (3S)-2,3-epoxy-2,3-dihydrosqualene[c] '''=>''' 1 cycloartenol[c]
+
** 1 L-tyrosine[c] '''+''' 1 ATP[c] '''+''' 1 detyrosinated α-tubulin[c] '''=>''' 1 α-tubulin[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14526]]
+
* [[Tiso_gene_17450]]
−
** [[pantograph]]-[[athaliana]]
+
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_4516]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_20330]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_10440]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_9268]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_17589]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_17234]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_14575]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_10591]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_3379]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_15094]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_15093]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_5828]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7154]], ergosterol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7154 PWY-7154]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
 
−
** '''10''' reactions found over '''36''' reactions in the full pathway
 
−
* [[PWY-6098]], diploterol and cycloartenol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6098 PWY-6098]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6109]], mangrove triterpenoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6109 PWY-6109]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7155]], 7-dehydroporiferasterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7155 PWY-7155]
 
−
** '''3''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6115]], avenacin biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6115 PWY-6115]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[athaliana]]
+
* Category: [[annotation]]
−
*** [[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21311 21311]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03200 R03200]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04730 R04730]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/O23909 O23909]
+
** [http://www.uniprot.org/uniprot/P38160 P38160]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-5.4.99.8}}
+
{{#set: common name=tubulin-tyrosine_ligase}}
−
{{#set: gene associated=Tiso_gene_14526}}
+
{{#set: ec number=EC-6.3.2.25}}
−
{{#set: in pathway=PWY-7154|PWY-2541|PWY-6098|PWY-6109|PWY-7155|PWY-6115}}
+
{{#set: gene associated=Tiso_gene_17450|Tiso_gene_4516|Tiso_gene_20330|Tiso_gene_10440|Tiso_gene_9268|Tiso_gene_17589|Tiso_gene_17234|Tiso_gene_14575|Tiso_gene_10591|Tiso_gene_3379|Tiso_gene_15094|Tiso_gene_15093|Tiso_gene_5828}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 01:09, 19 March 2018

Reaction 6.3.2.25-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • tubulin-tyrosine_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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