Difference between revisions of "PHOSPHORIBOSYL-AMP"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD66-29 CPD66-29] == * smiles: ** CC24(CCC(=O)CC(=CC[CH]1([CH]3(CCC(=O)C(CC[CH]12)(C)3)))4) *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-ACETYLTRANSFER-RXN ACETYL-COA-ACETYLTRANSFER-RXN] == * direction: ** REVERSIBLE * ec num...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD66-29 CPD66-29] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-ACETYLTRANSFER-RXN ACETYL-COA-ACETYLTRANSFER-RXN] ==
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* smiles:
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* direction:
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** CC24(CCC(=O)CC(=CC[CH]1([CH]3(CCC(=O)C(CC[CH]12)(C)3)))4)
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** REVERSIBLE
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* inchi key:
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* ec number:
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** InChIKey=SQGZFRITSMYKRH-QAGGRKNESA-N
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** [http://enzyme.expasy.org/EC/2.3.1.9 EC-2.3.1.9]
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* common name:
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** 5-androstene-3,17-dione
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* molecular weight:
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** 286.413   
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* Synonym(s):
 
* Synonym(s):
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** androst-5-ene-3,17-dione
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN66-342]]
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** 2 [[ACETYL-COA]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[ACETOACETYL-COA]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
 +
** 2 acetyl-CoA[c] '''<=>''' 1 coenzyme A[c] '''+''' 1 acetoacetyl-CoA[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_16181]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_15327]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_17451]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate): [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY]
 +
** '''4''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5177]], glutaryl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5177 PWY-5177]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6583]], pyruvate fermentation to butanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[P163-PWY]], L-lysine fermentation to acetate and butanoate: [http://metacyc.org/META/NEW-IMAGE?object=P163-PWY P163-PWY]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6883]], pyruvate fermentation to butanol II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5676]], acetyl-CoA fermentation to butanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5676 PWY-5676]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6588]], pyruvate fermentation to acetone: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6588 PWY-6588]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7779]], methyl tert-butyl ether degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7779 PWY-7779]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7778]], 2-methylpropene degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7778 PWY-7778]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY1-3]], polyhydroxybutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1-3 PWY1-3]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
 +
** '''8''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-6876]], isopropanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6876 PWY-6876]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[CENTFERM-PWY]], pyruvate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5741]], ethylmalonyl-CoA pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5741 PWY-5741]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[ACETOACETATE-DEG-PWY]], acetoacetate degradation (to acetyl CoA): [http://metacyc.org/META/NEW-IMAGE?object=ACETOACETATE-DEG-PWY ACETOACETATE-DEG-PWY]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7216]], (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7216 PWY-7216]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY66-368]], ketolysis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-368 PWY66-368]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401]
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** '''5''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
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** '''5''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?C20252 C20252]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21036 21036]
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* CHEMSPIDER:
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* LIGAND-RXN:
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** [http://www.chemspider.com/Chemical-Structure.543261.html 543261]
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** [http://www.genome.jp/dbget-bin/www_bget?R00238 R00238]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=83865 83865]
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** [http://www.uniprot.org/uniprot/Q8CAY6 Q8CAY6]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P41338 P41338]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=160531 160531]
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** [http://www.uniprot.org/uniprot/P45362 P45362]
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{{#set: smiles=CC24(CCC(=O)CC(=CC[CH]1([CH]3(CCC(=O)C(CC[CH]12)(C)3)))4)}}
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** [http://www.uniprot.org/uniprot/Q9BWD1 Q9BWD1]
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{{#set: inchi key=InChIKey=SQGZFRITSMYKRH-QAGGRKNESA-N}}
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** [http://www.uniprot.org/uniprot/P45359 P45359]
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{{#set: common name=5-androstene-3,17-dione}}
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** [http://www.uniprot.org/uniprot/P24752 P24752]
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{{#set: molecular weight=286.413    }}
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** [http://www.uniprot.org/uniprot/Q12598 Q12598]
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{{#set: common name=androst-5-ene-3,17-dione}}
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** [http://www.uniprot.org/uniprot/P45369 P45369]
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{{#set: produced by=RXN66-342}}
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** [http://www.uniprot.org/uniprot/P46707 P46707]
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** [http://www.uniprot.org/uniprot/P73825 P73825]
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** [http://www.uniprot.org/uniprot/Q43637 Q43637]
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** [http://www.uniprot.org/uniprot/Q9UQW6 Q9UQW6]
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** [http://www.uniprot.org/uniprot/Q9Z3Y4 Q9Z3Y4]
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** [http://www.uniprot.org/uniprot/P77852 P77852]
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** [http://www.uniprot.org/uniprot/Q9XD81 Q9XD81]
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** [http://www.uniprot.org/uniprot/Q9ZGI9 Q9ZGI9]
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** [http://www.uniprot.org/uniprot/Q9L8E0 Q9L8E0]
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** [http://www.uniprot.org/uniprot/P14611 P14611]
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** [http://www.uniprot.org/uniprot/P07097 P07097]
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** [http://www.uniprot.org/uniprot/P17764 P17764]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.3.1.9}}
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{{#set: gene associated=Tiso_gene_16181|Tiso_gene_15327|Tiso_gene_17451}}
 +
{{#set: in pathway=P162-PWY|PWY-5177|PWY-6583|P163-PWY|PWY-6883|PWY-5676|PWY-6588|PWY-7779|PWY-7778|PWY1-3|PWY-5789|PWY-6876|CENTFERM-PWY|PWY-7391|PWY-5741|PWY-6174|ACETOACETATE-DEG-PWY|PWY66-367|PWY-7216|PWY-922|PWY66-368|PWY-7401|PWY-6863|PWY-7524}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 01:09, 19 March 2018

Reaction ACETYL-COA-ACETYLTRANSFER-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 acetyl-CoA[c] <=> 1 coenzyme A[c] + 1 acetoacetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P162-PWY, L-glutamate degradation V (via hydroxyglutarate): P162-PWY
    • 4 reactions found over 11 reactions in the full pathway
  • PWY-5177, glutaryl-CoA degradation: PWY-5177
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6583, pyruvate fermentation to butanol I: PWY-6583
    • 4 reactions found over 8 reactions in the full pathway
  • P163-PWY, L-lysine fermentation to acetate and butanoate: P163-PWY
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-6883, pyruvate fermentation to butanol II (engineered): PWY-6883
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-5676, acetyl-CoA fermentation to butanoate II: PWY-5676
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6588, pyruvate fermentation to acetone: PWY-6588
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7779, methyl tert-butyl ether degradation: PWY-7779
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-7778, 2-methylpropene degradation: PWY-7778
    • 2 reactions found over 8 reactions in the full pathway
  • PWY1-3, polyhydroxybutanoate biosynthesis: PWY1-3
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
    • 8 reactions found over 16 reactions in the full pathway
  • PWY-6876, isopropanol biosynthesis (engineered): PWY-6876
    • 2 reactions found over 5 reactions in the full pathway
  • CENTFERM-PWY, pyruvate fermentation to butanoate: CENTFERM-PWY
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7391, isoprene biosynthesis II (engineered): PWY-7391
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-5741, ethylmalonyl-CoA pathway: PWY-5741
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-6174, mevalonate pathway II (archaea): PWY-6174
    • 5 reactions found over 7 reactions in the full pathway
  • ACETOACETATE-DEG-PWY, acetoacetate degradation (to acetyl CoA): ACETOACETATE-DEG-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • PWY66-367, ketogenesis: PWY66-367
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7216, (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered): PWY-7216
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-922, mevalonate pathway I: PWY-922
    • 6 reactions found over 7 reactions in the full pathway
  • PWY66-368, ketolysis: PWY66-368
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7401, crotonate fermentation (to acetate and cyclohexane carboxylate): PWY-7401
    • 5 reactions found over 17 reactions in the full pathway
  • PWY-6863, pyruvate fermentation to hexanol (engineered): PWY-6863
    • 5 reactions found over 11 reactions in the full pathway
  • PWY-7524, mevalonate pathway III (archaea): PWY-7524
    • 4 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PHOSPHORIBOSYL-AMP&oldid=28929"