Difference between revisions of "Cis-delta15-gheddoyl-ACPs"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_5047 == * left end position: ** 11687 * transcription direction: ** POSITIVE * right end position: ** 13971 * centisome position: ** 83.639...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.9-RXN 1.5.1.9-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** saccharopine_dehydrogen...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_5047 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.9-RXN 1.5.1.9-RXN] ==
−
* left end position:
+
* direction:
−
** 11687
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** saccharopine_dehydrogenase
−
* right end position:
+
* ec number:
−
** 13971
+
** [http://enzyme.expasy.org/EC/1.5.1.9 EC-1.5.1.9]
−
* centisome position:
+
−
** 83.63988   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[HISTCYCLOHYD-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[WATER]][c] '''+''' 1 [[SACCHAROPINE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ALLYSINE]][c]
−
***automated-name-match
+
* With common name(s):
−
== Pathways associated ==
+
** 1 H2O[c] '''+''' 1 L-saccharopine[c] '''+''' 1 NAD+[c] '''=>''' 1 L-glutamate[c] '''+''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 (S)-2-amino-6-oxohexanoate[c]
−
* [[HISTSYN-PWY]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_1156]]
 +
** [[pantograph]]-[[athaliana]]
 +
* [[Tiso_gene_10095]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_7038]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_9366]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_7039]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_4160]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways ==
 +
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-DEG1-PWY LYSINE-DEG1-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=11687}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24520 24520]
−
{{#set: right end position=13971}}
+
* LIGAND-RXN:
−
{{#set: centisome position=83.63988    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02313 R02313]
−
{{#set: reaction associated=HISTCYCLOHYD-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: pathway associated=HISTSYN-PWY}}
+
{{#set: common name=saccharopine_dehydrogenase}}
 +
{{#set: ec number=EC-1.5.1.9}}
 +
{{#set: gene associated=Tiso_gene_1156|Tiso_gene_10095|Tiso_gene_7038|Tiso_gene_9366|Tiso_gene_7039|Tiso_gene_4160}}
 +
{{#set: in pathway=LYSINE-DEG1-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 00:09, 19 March 2018

Reaction 1.5.1.9-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • saccharopine_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L-saccharopine[c] + 1 NAD+[c] => 1 L-glutamate[c] + 1 NADH[c] + 1 H+[c] + 1 (S)-2-amino-6-oxohexanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Cis-delta15-gheddoyl-ACPs&oldid=28969"