Difference between revisions of "Tiso gene 19480"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16415 RXN-16415] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase ** long_ch...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16998 RXN-16998] == * direction: ** LEFT-TO-RIGHT * common name: ** cytoplasmic ** pgm_pmm * Sy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16415 RXN-16415] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16998 RXN-16998] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** polyketide_synthase
+
** cytoplasmic
−
** long_chain_acyl-_synthetase
+
** pgm_pmm
−
** acyl-_synthetase
+
−
** ORF
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[Very-long-chain-fatty-acids]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[VERY-LONG-CHAIN-FATTY-ACYL-COA]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[Phosphoglucomutase]][c] '''+''' 1 [[ALPHA-GLUCOSE-16-BISPHOSPHATE]][c] '''=>''' 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[Phosphorylated-phosphoglucomutase]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 a very-long-chain fatty acid[c] '''<=>''' 1 diphosphate[c] '''+''' 1 a very long chain fatty acyl-CoA[c] '''+''' 1 AMP[c]
+
** 1 a phosphoglucomutase[c] '''+''' 1 &alpha;-glucose 1,6-bisphosphate[c] '''=>''' 1 D-glucopyranose 6-phosphate[c] '''+''' 1 a phosphorylated phosphoglucomutase[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7855]]
+
* [[Tiso_gene_13477]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_4191]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_348]]
+
* [[Tiso_gene_4816]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
−
***EC-NUMBER
 
−
* [[Tiso_gene_9394]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_10876]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_13394]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_135]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_500]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_136]]
 
−
** IN-SILICO_ANNOTATION
 
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pathwaytools]]
−
*** [[in-silico_annotation]]
+
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: common name=cytoplasmic}}
−
{{#set: common name=long_chain_acyl-_synthetase}}
+
{{#set: common name=pgm_pmm}}
−
{{#set: common name=acyl-_synthetase}}
+
{{#set: gene associated=Tiso_gene_13477|Tiso_gene_4816}}
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-6.2.1.3}}
+
−
{{#set: gene associated=Tiso_gene_7855|Tiso_gene_4191|Tiso_gene_348|Tiso_gene_9394|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_500|Tiso_gene_136}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 00:12, 19 March 2018

Reaction RXN-16998

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cytoplasmic
    • pgm_pmm
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_13477
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER
  • Tiso_gene_4816
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19480&oldid=29143"