Difference between revisions of "RXN-15831"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8028 RXN-8028] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/5....")
(Created page with "Category:Gene == Gene Tiso_gene_3483 == * left end position: ** 4795 * transcription direction: ** POSITIVE * right end position: ** 5612 * centisome position: ** 28.8265...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8028 RXN-8028] ==
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== Gene Tiso_gene_3483 ==
* direction:
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* left end position:
** LEFT-TO-RIGHT
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** 4795
* ec number:
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* transcription direction:
** [http://enzyme.expasy.org/EC/5.5.1.18 EC-5.5.1.18]
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** POSITIVE
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* right end position:
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** 5612
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* centisome position:
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** 28.8265   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[F16BDEPHOS-RXN]]
** 1 [[CPD1F-115]][c] '''=>''' 1 [[CPD-7414]][c]
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** in-silico_annotation
* With common name(s):
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***automated-name-match
** 1 δ-carotene[c] '''=>''' 1 ε-carotene[c]
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== Pathways associated ==
 
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* [[GLUCONEO-PWY]]
== Genes associated with this reaction  ==
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* [[SUCSYN-PWY]]
Genes have been associated with this reaction based on different elements listed below.
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* [[GLYCOLYSIS]]
* [[Tiso_gene_11980]]
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* [[CALVIN-PWY]]
** [[pantograph]]-[[athaliana]]
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* [[PWY-5484]]
** [[pantograph]]-[[esiliculosus]]
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* [[P185-PWY]]
** [[pantograph]]-[[creinhardtii]]
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* [[PWY66-399]]
== Pathways  ==
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* [[PWY-5175]], lactucaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5175 PWY-5175]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: left end position=4795}}
** [http://www.genome.jp/dbget-bin/www_bget?R07840 R07840]
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{{#set: transcription direction=POSITIVE}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5612}}
{{#set: ec number=EC-5.5.1.18}}
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{{#set: centisome position=28.8265    }}
{{#set: gene associated=Tiso_gene_11980}}
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{{#set: reaction associated=F16BDEPHOS-RXN}}
{{#set: in pathway=PWY-5175}}
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{{#set: pathway associated=GLUCONEO-PWY|SUCSYN-PWY|GLYCOLYSIS|CALVIN-PWY|PWY-5484|P185-PWY|PWY66-399}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
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Revision as of 01:13, 19 March 2018

Gene Tiso_gene_3483

  • left end position:
    • 4795
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5612
  • centisome position:
    • 28.8265
  • Synonym(s):

Reactions associated

Pathways associated

External links