Difference between revisions of "Tiso gene 13434"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=23-EPOXY-23-DIHYDRO-2-METHYL-14-NAPHTHOQ 23-EPOXY-23-DIHYDRO-2-METHYL-14-NAPHTHOQ] == * smiles:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=23-EPOXY-23-DIHYDRO-2-METHYL-14-NAPHTHOQ 23-EPOXY-23-DIHYDRO-2-METHYL-14-NAPHTHOQ] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] ==
−
* smiles:
+
* direction:
−
** CC(C)CCCC(C)CCCC(C)CCCC(C)=CCC13(OC(C)(C(=O)C2(C=CC=CC(C(=O)1)=2))3)
+
** LEFT-TO-RIGHT
−
* inchi key:
+
* ec number:
−
** InChIKey=KUTXFBIHPWIDJQ-HBDFACPTSA-N
+
** [http://enzyme.expasy.org/EC/4.1.1.17 EC-4.1.1.17]
−
* common name:
+
−
** vitamin K 2,3-epoxide
+
−
* molecular weight:
+
−
** 466.703   
+
 
* Synonym(s):
 
* Synonym(s):
−
** 2,3-epoxyphylloquinone
 
−
** 2,3-epoxy-2,3-dihydro-2-methyl-3-phytyl-1,4-naphthoquinone
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
== Reaction(s) of unknown directionality ==
+
** 1 [[L-ORNITHINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PUTRESCINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
−
* [[1.1.4.1-RXN]]
+
* With common name(s):
 +
** 1 L-ornithine[c] '''+''' 1 H+[c] '''=>''' 1 putrescine[c] '''+''' 1 CO2[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_10737]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
* [[ORNDEG-PWY]], superpathway of ornithine degradation: [http://metacyc.org/META/NEW-IMAGE?object=ORNDEG-PWY ORNDEG-PWY]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-46]], putrescine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-46 PWY-46]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460204 5460204]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22964 22964]
−
* CHEMSPIDER:
+
* LIGAND-RXN:
−
** [http://www.chemspider.com/Chemical-Structure.4444391.html 4444391]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00670 R00670]
−
* CHEBI:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15759 15759]
+
** [http://www.uniprot.org/uniprot/P24169 P24169]
−
* LIGAND-CPD:
+
** [http://www.uniprot.org/uniprot/P27121 P27121]
−
** [http://www.genome.jp/dbget-bin/www_bget?C05849 C05849]
+
** [http://www.uniprot.org/uniprot/P27116 P27116]
−
* HMDB : HMDB02972
+
** [http://www.uniprot.org/uniprot/P27120 P27120]
−
{{#set: smiles=CC(C)CCCC(C)CCCC(C)CCCC(C)=CCC13(OC(C)(C(=O)C2(C=CC=CC(C(=O)1)=2))3)}}
+
** [http://www.uniprot.org/uniprot/P43099 P43099]
−
{{#set: inchi key=InChIKey=KUTXFBIHPWIDJQ-HBDFACPTSA-N}}
+
** [http://www.uniprot.org/uniprot/Q9X2I6 Q9X2I6]
−
{{#set: common name=vitamin K 2,3-epoxide}}
+
** [http://www.uniprot.org/uniprot/P08432 P08432]
−
{{#set: molecular weight=466.703    }}
+
** [http://www.uniprot.org/uniprot/P27118 P27118]
−
{{#set: common name=2,3-epoxyphylloquinone|2,3-epoxy-2,3-dihydro-2-methyl-3-phytyl-1,4-naphthoquinone}}
+
** [http://www.uniprot.org/uniprot/P11926 P11926]
−
{{#set: consumed or produced by=1.1.4.1-RXN}}
+
** [http://www.uniprot.org/uniprot/P14019 P14019]
 +
** [http://www.uniprot.org/uniprot/P00860 P00860]
 +
** [http://www.uniprot.org/uniprot/P09057 P09057]
 +
** [http://www.uniprot.org/uniprot/Q9TZZ6 Q9TZZ6]
 +
** [http://www.uniprot.org/uniprot/P44317 P44317]
 +
** [http://www.uniprot.org/uniprot/O66940 O66940]
 +
** [http://www.uniprot.org/uniprot/P27119 P27119]
 +
** [http://www.uniprot.org/uniprot/P49725 P49725]
 +
** [http://www.uniprot.org/uniprot/P50134 P50134]
 +
** [http://www.uniprot.org/uniprot/P93351 P93351]
 +
** [http://www.uniprot.org/uniprot/P93357 P93357]
 +
** [http://www.uniprot.org/uniprot/O15696 O15696]
 +
** [http://www.uniprot.org/uniprot/Q84527 Q84527]
 +
** [http://www.uniprot.org/uniprot/P41931 P41931]
 +
** [http://www.uniprot.org/uniprot/O69865 O69865]
 +
** [http://www.uniprot.org/uniprot/Q9UQW9 Q9UQW9]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-4.1.1.17}}
 +
{{#set: gene associated=Tiso_gene_10737}}
 +
{{#set: in pathway=ORNDEG-PWY|PWY-6305|PWY-46}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 00:13, 19 March 2018

Reaction ORNDECARBOX-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ORNDEG-PWY, superpathway of ornithine degradation: ORNDEG-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6305, putrescine biosynthesis IV: PWY-6305
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-46, putrescine biosynthesis III: PWY-46
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13434&oldid=29274"