Difference between revisions of "CPD-18350"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FE2GTPabc FE2GTPabc] == * direction: ** LEFT-TO-RIGHT * common name: ** ferrous iron uptake (GTP-de...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15829 RXN-15829] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_mitochondrial-proc...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FE2GTPabc FE2GTPabc] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15829 RXN-15829] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ferrous iron uptake (GTP-dependent), plasma membrane
+
** probable_mitochondrial-processingpeptidasesubunitbeta
 +
** cytochrome_b6-fcomplexiron-sulfurchloroplastic
 +
** ubiquinol-cytochrome_c_reductase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.10.2.2 EC-1.10.2.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[FE+2]][e] '''+''' 1.0 [[GTP]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[FE+2]][c] '''+''' 1.0 [[Pi]][c] '''+''' 1.0 [[GDP]][c] '''+''' 1.0 [[PROTON]][c]
+
** 2 [[Reduced-CycA1-cytochromes]][e] '''+''' 4 [[PROTON]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 2 [[Oxidized-CycA1-cytochromes]][e] '''+''' 1 [[Ubiquinols]][c] '''+''' 2 [[PROTON]][e]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Fe2+[e] '''+''' 1.0 GTP[c] '''+''' 1.0 H2O[c] '''=>''' 1.0 Fe2+[c] '''+''' 1.0 phosphate[c] '''+''' 1.0 GDP[c] '''+''' 1.0 H+[c]
+
** 2 a reduced CycA1 cytochrome[e] '''+''' 4 H+[c] '''+''' 1 a ubiquinone[c] '''=>''' 2 an oxidized CycA1 cytochrome[e] '''+''' 1 an ubiquinol[c] '''+''' 2 H+[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2686]]
+
* [[Tiso_gene_9627]]
−
** [[pantograph]]-[[creinhardtii]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_7235]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_18330]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_15926]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_4973]]
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6692]], Fe(II) oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6692 PWY-6692]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[creinhardtii]]
+
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ferrous iron uptake (GTP-dependent), plasma membrane}}
+
{{#set: common name=probable_mitochondrial-processingpeptidasesubunitbeta}}
−
{{#set: gene associated=Tiso_gene_2686}}
+
{{#set: common name=cytochrome_b6-fcomplexiron-sulfurchloroplastic}}
−
{{#set: in pathway=}}
+
{{#set: common name=ubiquinol-cytochrome_c_reductase}}
 +
{{#set: ec number=EC-1.10.2.2}}
 +
{{#set: gene associated=Tiso_gene_9627|Tiso_gene_7235|Tiso_gene_18330|Tiso_gene_15926|Tiso_gene_4973}}
 +
{{#set: in pathway=PWY-6692}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:02, 10 January 2018

Reaction RXN-15829

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • probable_mitochondrial-processingpeptidasesubunitbeta
    • cytochrome_b6-fcomplexiron-sulfurchloroplastic
    • ubiquinol-cytochrome_c_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6692, Fe(II) oxidation: PWY-6692
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-18350&oldid=11353"