Difference between revisions of "RXN-10619"

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(Created page with "Category:Gene == Gene Tiso_gene_10254 == * left end position: ** 6520 * transcription direction: ** NEGATIVE * right end position: ** 8475 * centisome position: ** 75.0806...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE--TRNA-LIGASE-RXN METHIONINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_10254 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE--TRNA-LIGASE-RXN METHIONINE--TRNA-LIGASE-RXN] ==
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* left end position:
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* direction:
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** 6520
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** methionyl-trna_synthetase
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* right end position:
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* ec number:
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** 8475
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** [http://enzyme.expasy.org/EC/6.1.1.10 EC-6.1.1.10]
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* centisome position:
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** 75.08061   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-12720]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[ATP]][c] '''+''' 1 [[Elongation-tRNAMet]][c] '''+''' 1 [[MET]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-MET-tRNAs]][c] '''+''' 1 [[PPI]][c]
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***automated-name-match
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* With common name(s):
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** [[pantograph]]-[[athaliana]]
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** 1 ATP[c] '''+''' 1 elongator tRNAmet[c] '''+''' 1 L-methionine[c] '''=>''' 1 AMP[c] '''+''' 1 an L-methionyl-[elongator tRNAmet][c] '''+''' 1 diphosphate[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_284]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[SULFATE-ADENYLYLTRANS-RXN]]
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* [[Tiso_gene_406]]
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** in-silico_annotation
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** EXPERIMENTAL_ANNOTATION
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***automated-name-match
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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== Pathways ==
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* [[PWY-6932]]
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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* [[DISSULFRED-PWY]]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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* [[PWY-5340]]
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== Reconstruction information  ==
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* [[PWY-5278]]
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* Category: [[orthology]]
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* [[SULFMETII-PWY]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-6683]]
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*** Tool: [[pantograph]]
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* [[P224-PWY]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6520}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13481 13481]
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{{#set: right end position=8475}}
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* LIGAND-RXN:
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{{#set: centisome position=75.08061    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03659 R03659]
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{{#set: reaction associated=RXN-12720|SULFATE-ADENYLYLTRANS-RXN}}
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* UNIPROT:
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{{#set: pathway associated=PWY-6932|DISSULFRED-PWY|PWY-5340|PWY-5278|SULFMETII-PWY|PWY-6683|P224-PWY}}
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** [http://www.uniprot.org/uniprot/P56127 P56127]
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** [http://www.uniprot.org/uniprot/Q44951 Q44951]
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** [http://www.uniprot.org/uniprot/P47267 P47267]
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** [http://www.uniprot.org/uniprot/O84035 O84035]
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** [http://www.uniprot.org/uniprot/O28819 O28819]
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** [http://www.uniprot.org/uniprot/O58721 O58721]
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** [http://www.uniprot.org/uniprot/O83776 O83776]
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** [http://www.uniprot.org/uniprot/O33925 O33925]
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** [http://www.uniprot.org/uniprot/Q58659 Q58659]
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** [http://www.uniprot.org/uniprot/O66738 O66738]
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** [http://www.uniprot.org/uniprot/Q9ZCP0 Q9ZCP0]
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** [http://www.uniprot.org/uniprot/Q9PP85 Q9PP85]
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** [http://www.uniprot.org/uniprot/O26687 O26687]
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** [http://www.uniprot.org/uniprot/O67298 O67298]
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** [http://www.uniprot.org/uniprot/Q9JWP0 Q9JWP0]
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** [http://www.uniprot.org/uniprot/Q9ZKG9 Q9ZKG9]
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** [http://www.uniprot.org/uniprot/Q9Z959 Q9Z959]
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** [http://www.uniprot.org/uniprot/Q9CHE0 Q9CHE0]
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** [http://www.uniprot.org/uniprot/P43828 P43828]
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** [http://www.uniprot.org/uniprot/P56192 P56192]
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** [http://www.uniprot.org/uniprot/Q50319 Q50319]
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** [http://www.uniprot.org/uniprot/P23920 P23920]
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** [http://www.uniprot.org/uniprot/P75091 P75091]
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** [http://www.uniprot.org/uniprot/Q55729 Q55729]
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** [http://www.uniprot.org/uniprot/P22438 P22438]
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** [http://www.uniprot.org/uniprot/P00958 P00958]
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** [http://www.uniprot.org/uniprot/P00959 P00959]
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** [http://www.uniprot.org/uniprot/Q9M2T9 Q9M2T9]
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** [http://www.uniprot.org/uniprot/O23761 O23761]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=methionyl-trna_synthetase}}
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{{#set: ec number=EC-6.1.1.10}}
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{{#set: gene associated=Tiso_gene_284|Tiso_gene_406}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 01:15, 19 March 2018

Reaction METHIONINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methionyl-trna_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 elongator tRNAmet[c] + 1 L-methionine[c] => 1 AMP[c] + 1 an L-methionyl-[elongator tRNAmet][c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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