Difference between revisions of "2-2-N-linked-Glycan"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14271 CPD-14271] == * smiles: ** CCCCCCCCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12878 RXN-12878] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin-dependent_glutam...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14271 CPD-14271] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12878 RXN-12878] ==
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* smiles:
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* direction:
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** CCCCCCCCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=FYBVHNZJDVUVLJ-IBYUJNRCSA-J
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* common name:
 
* common name:
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** 3-oxoicosanoyl-CoA
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** ferredoxin-dependent_glutamate_synthase
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* molecular weight:
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** 1072.006   
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-13298]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLT]][c] '''=>''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
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* [[RXN-13294]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 H2O[c] '''+''' 1 L-glutamate[c] '''=>''' 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 ammonium[c] '''+''' 1 2-oxoglutarate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1773]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_1154]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2581]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=70678676 70678676]
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** [http://www.genome.jp/dbget-bin/www_bget?R10086 R10086]
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* CHEBI:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=65115 65115]
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{{#set: common name=ferredoxin-dependent_glutamate_synthase}}
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{{#set: smiles=CCCCCCCCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O}}
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{{#set: gene associated=Tiso_gene_1773|Tiso_gene_1154|Tiso_gene_2581}}
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{{#set: inchi key=InChIKey=FYBVHNZJDVUVLJ-IBYUJNRCSA-J}}
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{{#set: in pathway=}}
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{{#set: common name=3-oxoicosanoyl-CoA}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: molecular weight=1072.006    }}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: consumed by=RXN-13298}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: produced by=RXN-13294}}
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Revision as of 00:17, 19 March 2018

Reaction RXN-12878

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ferredoxin-dependent_glutamate_synthase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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