Difference between revisions of "Initiation-tRNAmet"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TROPINE TROPINE] == * smiles: ** C[N+]1(C2(CCC1CC(O)C2)) * inchi key: ** InChIKey=CYHOMWAPJJPNM...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=STRICTOSIDINE-SYNTHASE-RXN STRICTOSIDINE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=STRICTOSIDINE-SYNTHASE-RXN STRICTOSIDINE-SYNTHASE-RXN] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | + | ||
| − | + | ||
* common name: | * common name: | ||
| − | ** | + | ** strictosidine_synthase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/4.3.3.2 EC-4.3.3.2] |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | == | + | * With identifiers: |
| − | * [[ | + | ** 1 [[TRYPTAMINE]][c] '''+''' 1 [[SECOLOGANIN-CPD]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[STRICTOSIDINE]][c] |
| − | == | + | * With common name(s): |
| − | * [[ | + | ** 1 tryptamine[c] '''+''' 1 secologanin[c] '''=>''' 1 H2O[c] '''+''' 1 strictosidine[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[Tiso_gene_8474]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | ** [[pantograph]]-[[athaliana]] | ||
| + | * [[Tiso_gene_8473]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-5290]], secologanin and strictosidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5290 PWY-5290] | ||
| + | ** '''1''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[PWY-6326]], camptothecin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6326 PWY-6326] | ||
| + | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | * | + | * RHEA: |
| − | * LIGAND- | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15013 15013] |
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | * LIGAND-RXN: |
| − | * | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03738 R03738] |
| − | ** [http://www. | + | * UNIPROT: |
| − | * | + | ** [http://www.uniprot.org/uniprot/Q9VAQ9 Q9VAQ9] |
| − | ** [http:// | + | ** [http://www.uniprot.org/uniprot/P68175 P68175] |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P18417 P18417] |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P68174 P68174] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=strictosidine_synthase}} |
| − | {{#set: | + | {{#set: ec number=EC-4.3.3.2}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_8474|Tiso_gene_8473}} |
| + | {{#set: in pathway=PWY-5290|PWY-6326}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 00:17, 19 March 2018
Contents
Reaction STRICTOSIDINE-SYNTHASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- strictosidine_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 TRYPTAMINE[c] + 1 SECOLOGANIN-CPD[c] => 1 WATER[c] + 1 STRICTOSIDINE[c]
- With common name(s):
- 1 tryptamine[c] + 1 secologanin[c] => 1 H2O[c] + 1 strictosidine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_8474
- IN-SILICO_ANNOTATION
- EC-NUMBER
- pantograph-athaliana
- IN-SILICO_ANNOTATION
- Tiso_gene_8473
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- PWY-5290, secologanin and strictosidine biosynthesis: PWY-5290
- 1 reactions found over 13 reactions in the full pathway
- PWY-6326, camptothecin biosynthesis: PWY-6326
- 1 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
