Difference between revisions of "RXN-13198"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_15256 == * left end position: ** 2323 * transcription direction: ** NEGATIVE * right end position: ** 5023 * centisome position: ** 45.2914...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPDIGLYSYN-RXN CDPDIGLYSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphatidate_c...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_15256 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPDIGLYSYN-RXN CDPDIGLYSYN-RXN] ==
−
* left end position:
+
* direction:
−
** 2323
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** phosphatidate_cytidylyltransferase
−
* right end position:
+
* ec number:
−
** 5023
+
** [http://enzyme.expasy.org/EC/2.7.7.41 EC-2.7.7.41]
−
* centisome position:
+
−
** 45.29148   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ACID-PHOSPHATASE-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[PROTON]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[CTP]][c] '''=>''' 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[PPI]][c]
−
***ec-number
+
* With common name(s):
 +
** 1 H+[c] '''+''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 CTP[c] '''=>''' 1 a CDP-diacylglycerol[c] '''+''' 1 diphosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_2311]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_3523]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[RXN-5822]]
+
* [[Tiso_gene_3522]]
−
** in-silico_annotation
+
−
***ec-number
+
−
* [[RXNQT-4191]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
== Pathways associated ==
+
== Pathways ==
−
* [[PWY-6907]]
+
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
−
* [[PWY-6348]]
+
** '''7''' reactions found over '''16''' reactions in the full pathway
−
* [[PWY-7356]]
+
* [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667]
−
* [[PWY-6908]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[NAD-BIOSYNTHESIS-II]]
+
* [[PWY-5981]], CDP-diacylglycerol biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5981 PWY-5981]
−
* [[PWY-5083]]
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY]]
+
* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1319 PWY0-1319]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=2323}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16229 16229]
−
{{#set: right end position=5023}}
+
* LIGAND-RXN:
−
{{#set: centisome position=45.29148    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01799 R01799]
−
{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822|RXNQT-4191}}
+
* UNIPROT:
−
{{#set: pathway associated=PWY-6907|PWY-6348|PWY-7356|PWY-6908|NAD-BIOSYNTHESIS-II|PWY-5083|NADPHOS-DEPHOS-PWY}}
+
** [http://www.uniprot.org/uniprot/Q9JX34 Q9JX34]
 +
** [http://www.uniprot.org/uniprot/Q9PMV2 Q9PMV2]
 +
** [http://www.uniprot.org/uniprot/Q59640 Q59640]
 +
** [http://www.uniprot.org/uniprot/P73548 P73548]
 +
** [http://www.uniprot.org/uniprot/P0ABG1 P0ABG1]
 +
** [http://www.uniprot.org/uniprot/O04940 O04940]
 +
** [http://www.uniprot.org/uniprot/Q49433 Q49433]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=phosphatidate_cytidylyltransferase}}
 +
{{#set: ec number=EC-2.7.7.41}}
 +
{{#set: gene associated=Tiso_gene_2311|Tiso_gene_3523|Tiso_gene_3522}}
 +
{{#set: in pathway=PWY-7817|PWY-5667|PWY-5981|PWY0-1319}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 00:17, 19 March 2018

Reaction CDPDIGLYSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphatidate_cytidylyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] + 1 CTP[c] => 1 a CDP-diacylglycerol[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus): PWY-7817
    • 7 reactions found over 16 reactions in the full pathway
  • PWY-5667, CDP-diacylglycerol biosynthesis I: PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5981, CDP-diacylglycerol biosynthesis III: PWY-5981
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319, CDP-diacylglycerol biosynthesis II: PWY0-1319
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13198&oldid=29571"