Difference between revisions of "PWY-7416"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN] == * direction: ** LEFT-TO...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8024 RXN-8024] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8024 RXN-8024] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* ec number:
 
** [http://enzyme.expasy.org/EC/3.1.4.35 EC-3.1.4.35]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CGMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GMP]][c]
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** 1 [[CPD-7408]][c] '''+''' 1 [[Acceptor]][c] '''=>''' 1 [[CPD1F-98]][c] '''+''' 1 [[Donor-H2]][c]
 
* With common name(s):
 
* With common name(s):
** 1 cyclic-GMP[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 GMP[c]
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** 1 all-trans phytofluene[c] '''+''' 1 an oxidized electron acceptor[c] '''=>''' 1 all-trans-ζ-carotene[c] '''+''' 1 a reduced electron acceptor[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_9644]]
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* [[Tiso_gene_2193]]
** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[esiliculosus]]
** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_3579]]
* [[Tiso_gene_13785]]
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** [[pantograph]]-[[esiliculosus]]
** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_12792]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
*** [[creinhardtii]]
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*** [[esiliculosus]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16957 16957]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30610 30610]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R01234 R01234]
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** [http://www.genome.jp/dbget-bin/www_bget?R04787 R04787]
* UNIPROT:
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** [http://www.uniprot.org/uniprot/P04972 P04972]
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** [http://www.uniprot.org/uniprot/P16586 P16586]
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** [http://www.uniprot.org/uniprot/P23439 P23439]
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** [http://www.uniprot.org/uniprot/P35913 P35913]
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** [http://www.uniprot.org/uniprot/P33726 P33726]
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** [http://www.uniprot.org/uniprot/P09174 P09174]
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** [http://www.uniprot.org/uniprot/P52731 P52731]
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** [http://www.uniprot.org/uniprot/P51160 P51160]
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** [http://www.uniprot.org/uniprot/P18545 P18545]
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** [http://www.uniprot.org/uniprot/O76074 O76074]
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** [http://www.uniprot.org/uniprot/P11541 P11541]
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** [http://www.uniprot.org/uniprot/P27664 P27664]
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** [http://www.uniprot.org/uniprot/Q62037 Q62037]
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** [http://www.uniprot.org/uniprot/P23440 P23440]
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{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-3.1.4.35}}
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{{#set: gene associated=Tiso_gene_2193|Tiso_gene_3579}}
{{#set: gene associated=Tiso_gene_9644|Tiso_gene_13785|Tiso_gene_12792}}
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{{#set: in pathway=PWY-6287}}
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=creinhardtii}}
+
{{#set: reconstruction source=esiliculosus}}

Revision as of 16:03, 10 January 2018

Reaction RXN-8024

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans phytofluene[c] + 1 an oxidized electron acceptor[c] => 1 all-trans-ζ-carotene[c] + 1 a reduced electron acceptor[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6287, neurosporene biosynthesis: PWY-6287
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links