Difference between revisions of "Tiso gene 18369"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE-DEHYDROGENASE-RXN SARCOSINE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-V-PWY ARGDEG-V-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE-DEHYDROGENASE-RXN SARCOSINE-DEHYDROGENASE-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
+
 
* common name:
 
* common name:
−
** L-arginine degradation X (arginine monooxygenase pathway)
+
** sarcosine_dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.5.8.3 EC-1.5.8.3]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
  '''3''' reactions found over '''3''' reactions in the full pathway
+
* With identifiers:
−
* [[ARGININE-2-MONOOXYGENASE-RXN]]
+
** 1 [[ETF-Oxidized]][c] '''+''' 1 [[SARCOSINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[ETF-Reduced]][c] '''+''' 1 [[FORMALDEHYDE]][c]
−
* [[GUANIDINOBUTANAMIDE-NH3-RXN]]
+
* With common name(s):
−
* [[GUANIDINOBUTYRASE-RXN]]
+
** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 sarcosine[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 glycine[c] '''+''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 formaldehyde[c]
−
== Reaction(s) not found ==
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_14788]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
== Pathways ==
 +
* [[CRNFORCAT-PWY]], creatinine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CRNFORCAT-PWY CRNFORCAT-PWY]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-4722]], creatinine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4722 PWY-4722]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2759}}
+
* RHEA:
−
{{#set: taxonomic range=TAX-201174}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19793 19793]
−
{{#set: common name=L-arginine degradation X (arginine monooxygenase pathway)}}
+
* LIGAND-RXN:
−
{{#set: reaction found=3}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00611 R00611]
−
{{#set: reaction not found=3}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: completion rate=100.0}}
+
{{#set: common name=sarcosine_dehydrogenase}}
 +
{{#set: ec number=EC-1.5.8.3}}
 +
{{#set: gene associated=Tiso_gene_14788}}
 +
{{#set: in pathway=CRNFORCAT-PWY|PWY-4722}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 19:17, 18 March 2018

Reaction SARCOSINE-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • sarcosine_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an oxidized electron-transfer flavoprotein[c] + 1 sarcosine[c] + 1 H2O[c] + 1 H+[c] => 1 glycine[c] + 1 a reduced electron-transfer flavoprotein[c] + 1 formaldehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CRNFORCAT-PWY, creatinine degradation I: CRNFORCAT-PWY
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-4722, creatinine degradation II: PWY-4722
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18369&oldid=23176"