Difference between revisions of "RXN-11410"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** seleno-amino acid biosynthesis
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** 3-dehydroquinate_synthase
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** pentafunctional_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.3.4 EC-4.2.3.4]
 
* Synonym(s):
 
* Synonym(s):
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** Se-amino acid biosynthesis
 
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** selenocysteine and selenomethionine biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''4''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[RXN-12726]]
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** 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''=>''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[Pi]][c]
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* [[RXN-12728]]
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* With common name(s):
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* [[RXN-12729]]
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** 1 3-deoxy-D-arabino-heptulosonate 7-phosphate[c] '''=>''' 1 3-dehydroquinate[c] '''+''' 1 phosphate[c]
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* [[SERINE-O-ACETTRAN-RXN]]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12730 RXN-12730]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3445]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_3446]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_5752]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3447]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_3974]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_5753]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6164]], 3-dehydroquinate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PLANTCYC : PWY-6936
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21968 21968]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-6936 PWY-6936]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03083 R03083]
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{{#set: common name=seleno-amino acid biosynthesis}}
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* UNIPROT:
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{{#set: common name=Se-amino acid biosynthesis|selenocysteine and selenomethionine biosynthesis}}
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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{{#set: reaction found=4}}
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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{{#set: reaction not found=5}}
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** [http://www.uniprot.org/uniprot/Q9CES8 Q9CES8]
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{{#set: completion rate=80.0}}
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** [http://www.uniprot.org/uniprot/Q9PNT2 Q9PNT2]
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** [http://www.uniprot.org/uniprot/P43879 P43879]
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** [http://www.uniprot.org/uniprot/Q9JVW5 Q9JVW5]
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** [http://www.uniprot.org/uniprot/P0A4Z4 P0A4Z4]
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** [http://www.uniprot.org/uniprot/P07639 P07639]
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** [http://www.uniprot.org/uniprot/Q9P7R0 Q9P7R0]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=3-dehydroquinate_synthase}}
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{{#set: common name=pentafunctional_protein}}
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{{#set: ec number=EC-4.2.3.4}}
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{{#set: gene associated=Tiso_gene_3445|Tiso_gene_3446|Tiso_gene_5752|Tiso_gene_3447|Tiso_gene_3974|Tiso_gene_5753}}
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{{#set: in pathway=PWY-6164}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:18, 18 March 2018

Reaction 3-DEHYDROQUINATE-SYNTHASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-dehydroquinate_synthase
    • pentafunctional_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6164, 3-dehydroquinate biosynthesis I: PWY-6164
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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