Difference between revisions of "Tiso gene 3446"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribof...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
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** 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
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** riboflavin_biosynthesis_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.99.12 EC-4.1.99.12]
 
* Synonym(s):
 
* Synonym(s):
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** light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''9''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[PROTOPORGENOXI-RXN]]
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** 1 [[RIBULOSE-5P]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''+''' 1 [[FORMATE]][c]
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* [[RXN-5282]]
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* With common name(s):
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* [[RXN-5283]]
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** 1 D-ribulose 5-phosphate[c] '''=>''' 1 H+[c] '''+''' 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c] '''+''' 1 formate[c]
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* [[RXN-5284]]
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* [[RXN-5285]]
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== Genes associated with this reaction  ==
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* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN0-1461]]
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* [[Tiso_gene_14275]]
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* [[RXN1F-20]]
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** IN-SILICO_ANNOTATION
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* [[UROGENDECARBOX-RXN]]
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***EC-NUMBER
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== Reaction(s) not found ==
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* [[Tiso_gene_19932]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
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** '''4''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2763}}
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* RHEA:
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{{#set: taxonomic range=TAX-33682}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18457 18457]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07281 R07281]
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{{#set: common name=3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I}}
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{{#set: common name=riboflavin_biosynthesis_protein}}
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{{#set: reaction found=9}}
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{{#set: ec number=EC-4.1.99.12}}
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{{#set: reaction not found=9}}
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{{#set: gene associated=Tiso_gene_14275|Tiso_gene_19932}}
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{{#set: completion rate=100.0}}
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{{#set: in pathway=PWY-6167|PWY-6168|RIBOSYN2-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:19, 18 March 2018

Reaction DIOHBUTANONEPSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • riboflavin_biosynthesis_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6167, flavin biosynthesis II (archaea): PWY-6167
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi): PWY-6168
    • 6 reactions found over 9 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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