Difference between revisions of "CPD-8613"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.4-RXN 3.4.21.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** trypsin_family ** try...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.4-RXN 3.4.21.4-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast)
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** trypsin_family
 +
** trypsin
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.4.21.4 EC-3.4.21.4]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''6''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[PNKIN-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[General-Protein-Substrates]][c] '''=>''' 1 [[Peptides-holder]][c]
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* [[PNPOXI-RXN]]
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* With common name(s):
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* [[PRPPAMIDOTRANS-RXN]]
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** 1 H2O[c] '''+''' 1 a protein[c] '''=>''' 1 a peptide[c]
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* [[PYRIDOXINE-4-DEHYDROGENASE-RXN]]
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* [[PYRIDOXKIN-RXN]]
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== Genes associated with this reaction  ==
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* [[PYRIMSYN3-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* [[Tiso_gene_4842]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14506 RXN-14506]
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14507 RXN-14507]
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* [[Tiso_gene_8820]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-3797 RXN3O-3797]
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** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_2777]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13074]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_1341]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12875]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4147]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17883]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1761]]
 +
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1997]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19324]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_20549]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_13684]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
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* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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* UNIPROT:
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{{#set: common name=4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast)}}
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** [http://www.uniprot.org/uniprot/P07477 P07477]
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{{#set: reaction found=6}}
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** [http://www.uniprot.org/uniprot/P08426 P08426]
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{{#set: reaction not found=9}}
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** [http://www.uniprot.org/uniprot/P35051 P35051]
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{{#set: completion rate=67.0}}
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** [http://www.uniprot.org/uniprot/P19799 P19799]
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** [http://www.uniprot.org/uniprot/Q7M434 Q7M434]
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** [http://www.uniprot.org/uniprot/Q7M435 Q7M435]
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** [http://www.uniprot.org/uniprot/Q7M390 Q7M390]
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** [http://www.uniprot.org/uniprot/Q7LZP8 Q7LZP8]
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** [http://www.uniprot.org/uniprot/Q7LZF8 Q7LZF8]
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** [http://www.uniprot.org/uniprot/Q7M433 Q7M433]
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** [http://www.uniprot.org/uniprot/P07146 P07146]
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** [http://www.uniprot.org/uniprot/P07478 P07478]
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** [http://www.uniprot.org/uniprot/Q7M3N1 Q7M3N1]
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** [http://www.uniprot.org/uniprot/Q7M432 Q7M432]
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** [http://www.uniprot.org/uniprot/P32821 P32821]
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** [http://www.uniprot.org/uniprot/P32822 P32822]
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** [http://www.uniprot.org/uniprot/P12788 P12788]
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** [http://www.uniprot.org/uniprot/P35050 P35050]
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** [http://www.uniprot.org/uniprot/Q29463 Q29463]
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** [http://www.uniprot.org/uniprot/P35034 P35034]
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** [http://www.uniprot.org/uniprot/P35031 P35031]
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** [http://www.uniprot.org/uniprot/P35032 P35032]
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** [http://www.uniprot.org/uniprot/P35033 P35033]
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** [http://www.uniprot.org/uniprot/P35030 P35030]
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** [http://www.uniprot.org/uniprot/P35035 P35035]
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** [http://www.uniprot.org/uniprot/P35036 P35036]
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** [http://www.uniprot.org/uniprot/P16049 P16049]
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** [http://www.uniprot.org/uniprot/Q91041 Q91041]
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** [http://www.uniprot.org/uniprot/P35038 P35038]
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** [http://www.uniprot.org/uniprot/P35041 P35041]
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** [http://www.uniprot.org/uniprot/P35037 P35037]
 +
** [http://www.uniprot.org/uniprot/Q92099 Q92099]
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** [http://www.uniprot.org/uniprot/Q27761 Q27761]
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** [http://www.uniprot.org/uniprot/Q90629 Q90629]
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** [http://www.uniprot.org/uniprot/Q90628 Q90628]
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** [http://www.uniprot.org/uniprot/Q90627 Q90627]
 +
** [http://www.uniprot.org/uniprot/Q7M436 Q7M436]
 +
** [http://www.uniprot.org/uniprot/P35045 P35045]
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** [http://www.uniprot.org/uniprot/P00765 P00765]
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** [http://www.uniprot.org/uniprot/P00764 P00764]
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** [http://www.uniprot.org/uniprot/P06872 P06872]
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** [http://www.uniprot.org/uniprot/P06871 P06871]
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** [http://www.uniprot.org/uniprot/P00761 P00761]
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** [http://www.uniprot.org/uniprot/P00762 P00762]
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** [http://www.uniprot.org/uniprot/P00763 P00763]
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** [http://www.uniprot.org/uniprot/P00775 P00775]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=trypsin_family}}
 +
{{#set: common name=trypsin}}
 +
{{#set: ec number=EC-3.4.21.4}}
 +
{{#set: gene associated=Tiso_gene_4842|Tiso_gene_8820|Tiso_gene_2777|Tiso_gene_13074|Tiso_gene_1341|Tiso_gene_12875|Tiso_gene_4147|Tiso_gene_17883|Tiso_gene_1761|Tiso_gene_1997|Tiso_gene_19324|Tiso_gene_20549|Tiso_gene_13684}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:21, 18 March 2018

Reaction 3.4.21.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trypsin_family
    • trypsin
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-8613&oldid=23750"