Difference between revisions of "PNKIN-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7291 PWY-7291] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4479 TAX-4479]
 
* common name:
 
* common name:
−
** oleate β-oxidation (isomerase-dependent, yeast)
+
** C4 photosynthetic carbon assimilation cycle, PEPCK type
 
* Synonym(s):
 
* Synonym(s):
 +
** C4 photosynthesis, PEPCK type
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''1''' reactions found over '''4''' reactions in the full pathway
+
  '''7''' reactions found over '''10''' reactions in the full pathway
−
* [[RXN-14576]]
+
* [[ALANINE-AMINOTRANSFERASE-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_5959]]
 +
*** [[Tiso_gene_10957]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-esiliculosus]]
 +
* [[ASPAMINOTRANS-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_6815]]
 +
*** [[Tiso_gene_13538]]
 +
*** [[Tiso_gene_15680]]
 +
*** [[Tiso_gene_17718]]
 +
*** [[Tiso_gene_17809]]
 +
*** [[Tiso_gene_12889]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[MALIC-NADP-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_6675]]
 +
*** [[Tiso_gene_12896]]
 +
*** [[Tiso_gene_12200]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[PEPCARBOXYKIN-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_19475]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-13697]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_13538]]
 +
*** [[Tiso_gene_17809]]
 +
*** [[Tiso_gene_12889]]
 +
*** [[Tiso_gene_6815]]
 +
*** [[Tiso_gene_15680]]
 +
*** [[Tiso_gene_17718]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-13698]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_10957]]
 +
*** [[Tiso_gene_5959]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN0-5224]]
 +
** 10 associated gene(s):
 +
*** [[Tiso_gene_18927]]
 +
*** [[Tiso_gene_19414]]
 +
*** [[Tiso_gene_6150]]
 +
*** [[Tiso_gene_7660]]
 +
*** [[Tiso_gene_1600]]
 +
*** [[Tiso_gene_3056]]
 +
*** [[Tiso_gene_9852]]
 +
*** [[Tiso_gene_17511]]
 +
*** [[Tiso_gene_19413]]
 +
*** [[Tiso_gene_20230]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14575 RXN-14575]
+
* [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-NADP+-RXN MALATE-DEHYDROGENASE-NADP+-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14577 RXN-14577]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7931 RXN-7931]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-4751}}
+
{{#set: taxonomic range=TAX-3398}}
−
{{#set: common name=oleate β-oxidation (isomerase-dependent, yeast)}}
+
{{#set: taxonomic range=TAX-4479}}
−
{{#set: reaction found=1}}
+
{{#set: common name=C4 photosynthetic carbon assimilation cycle, PEPCK type}}
−
{{#set: reaction not found=4}}
+
{{#set: common name=C4 photosynthesis, PEPCK type}}
−
{{#set: completion rate=25.0}}
+
{{#set: reaction found=7}}
 +
{{#set: total reaction=10}}
 +
{{#set: completion rate=70.0}}

Revision as of 18:24, 18 March 2018

Pathway PWY-7117

  • taxonomic range:
  • common name:
    • C4 photosynthetic carbon assimilation cycle, PEPCK type
  • Synonym(s):
    • C4 photosynthesis, PEPCK type

Reaction(s) found

7 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PNKIN-RXN&oldid=24135"