Difference between revisions of "RXN-14227"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13202 RXN-13202] == * direction: ** LEFT-TO-RIGHT * common name: ** carbamoyl_phosphate_synthet...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-DIPHOSPHATASE-RXN GUANOSINE-DIPHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13202 RXN-13202] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-DIPHOSPHATASE-RXN GUANOSINE-DIPHOSPHATASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** carbamoyl_phosphate_synthetase
+
** ORF
−
** protein_pyr1-3
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.4.16 EC-6.3.4.16]
+
** [http://enzyme.expasy.org/EC/3.6.1.42 EC-3.6.1.42]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[AMMONIUM]][c] '''=>''' 1 [[CARBAMOYL-P]][c] '''+''' 1 [[Pi]][c] '''+''' 2 [[ADP]][c] '''+''' 2 [[PROTON]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[GDP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[GMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 ATP[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 ammonium[c] '''=>''' 1 carbamoyl phosphate[c] '''+''' 1 phosphate[c] '''+''' 2 ADP[c] '''+''' 2 H+[c]
+
** 1 H2O[c] '''+''' 1 GDP[c] '''=>''' 1 H+[c] '''+''' 1 phosphate[c] '''+''' 1 GMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_4976]]
+
* [[Tiso_gene_20236]]
−
** IN-SILICO_ANNOTATION
+
** [[pantograph]]-[[esiliculosus]]
−
***EC-NUMBER
+
* [[Tiso_gene_12899]]
−
* [[Tiso_gene_4975]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_4685]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
 +
*** [[athaliana]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10624 10624]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22156 22156]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18030 18030]
+
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00149 R00149]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00328 R00328]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/O15829 O15829]
+
** [http://www.uniprot.org/uniprot/P32621 P32621]
−
** [http://www.uniprot.org/uniprot/O15830 O15830]
+
−
** [http://www.uniprot.org/uniprot/P07756 P07756]
+
−
** [http://www.uniprot.org/uniprot/P31327 P31327]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=carbamoyl_phosphate_synthetase}}
+
{{#set: common name=ORF}}
−
{{#set: common name=protein_pyr1-3}}
+
{{#set: ec number=EC-3.6.1.42}}
−
{{#set: ec number=EC-6.3.4.16}}
+
{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
−
{{#set: gene associated=Tiso_gene_4976|Tiso_gene_4975|Tiso_gene_4685}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-4984}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=esiliculosus|athaliana}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:05, 10 January 2018

Reaction GUANOSINE-DIPHOSPHATASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 GDP[c] => 1 H+[c] + 1 phosphate[c] + 1 GMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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