Difference between revisions of "FADSYN-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14037 RXN-14037] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ide...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14037 RXN-14037] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** REVERSIBLE
* common name:
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** superpathway of 5-aminoimidazole ribonucleotide biosynthesis
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* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''6''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
* [[AIRS-RXN]]
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** 1 [[THIAMINE-PYROPHOSPHATE]][c] '''+''' 1 [[2-ACETO-LACTATE]][c] '''<=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[2-ALPHA-HYDROXYETHYL-THPP]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_1369]]
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** 1 thiamine diphosphate[c] '''+''' 1 (S)-2-acetolactate[c] '''<=>''' 1 pyruvate[c] '''+''' 1 2-(&alpha;-hydroxyethyl)thiamine diphosphate[c]
** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
*** [[manual-primary_network]]
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Genes have been associated with this reaction based on different elements listed below.
*** [[annotation-experimental_annotation]]
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* Gene: [[Tiso_gene_11362]]
*** [[orthology-synechocystis]]
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** Source: [[orthology-athaliana]]
* [[FGAMSYN-RXN]]
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== Pathways  ==
** 1 associated gene(s):
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== Reconstruction information  ==
*** [[Tiso_gene_5865]]
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* Category: [[orthology]]
** 4 reconstruction source(s) associated:
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** Source: [[orthology-athaliana]]
*** [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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* [[GLYRIBONUCSYN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_1369]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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* [[PRPPAMIDOTRANS-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_1007]]
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*** [[Tiso_gene_9914]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PWY-6121]]
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** 0 associated gene:
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* [[PWY-6122]]
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** 0 associated gene:
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=GARTRANSFORMYL2-RXN GARTRANSFORMYL2-RXN]
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== External links  ==
 
== External links  ==
* ECOCYC:
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* RHEA:
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6277 PWY-6277]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24808 24808]
{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
{{#set: common name=superpathway of 5-aminoimidazole ribonucleotide biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04672 R04672]
{{#set: reaction found=6}}
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{{#set: direction=REVERSIBLE}}
{{#set: total reaction=9}}
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{{#set: gene associated=Tiso_gene_11362}}
{{#set: completion rate=67.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 14:44, 21 March 2018

Reaction RXN-14037

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links