Difference between revisions of "PROTOPORPHYRIN IX"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17856 RXN-17856] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROTOPORPHYRIN_IX PROTOPORPHYRIN_IX] == * smiles: ** C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17856 RXN-17856] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROTOPORPHYRIN_IX PROTOPORPHYRIN_IX] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=C4(C(CCC([O-])=O)=C(C)C(=CC3(C(C=C)=C(C)C(=CC=1N2)N=3))N4))=N5)))
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/2.3.1.bx EC-2.3.1.bx]
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** protoporphyrin IX
** [http://enzyme.expasy.org/EC/2.3.1.bv EC-2.3.1.bv]
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* inchi key:
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** InChIKey=KSFOVUSSGSKXFI-UJJXFSCMSA-L
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* molecular weight:
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** 560.651   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[RXN1F-20]]
** 1 [[ACETYL-COA]][c] '''+''' 1 [[L-methionyl-L-phenylalanyl-Protein]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[N-Ac-L-methionyl-L-phenylalanyl-Protein]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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* [[PROTOPORGENOXI-RXN]]
** 1 acetyl-CoA[c] '''+''' 1 an N-terminal-L-methionyl-L-phenylalanyl-[protein][c] '''=>''' 1 coenzyme A[c] '''+''' 1 H+[c] '''+''' 1 an N-terminal Nα-acetyl-L-methionyl-L-phenylalanyl-[protein][c]
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* [[PPPGO]]
 
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== Reaction(s) of unknown directionality ==
== Genes associated with this reaction  ==
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* [[PROTOHEMEFERROCHELAT-RXN]]
== Pathways  ==
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* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 553-12-8
{{#set: ec number=EC-2.3.1.bx}}
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* PUBCHEM:
{{#set: ec number=EC-2.3.1.bv}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=3794562 3794562]
{{#set: in pathway=PWY-7800}}
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* HMDB : HMDB00241
{{#set: reconstruction category=annotation}}
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* LIGAND-CPD:
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C02191 C02191]
{{#set: reconstruction tool=pathwaytools}}
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.20171337.html 20171337]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57306 57306]
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* BIGG : ppp9
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{{#set: smiles=C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=C4(C(CCC([O-])=O)=C(C)C(=CC3(C(C=C)=C(C)C(=CC=1N2)N=3))N4))=N5)))}}
 +
{{#set: common name=protoporphyrin IX}}
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{{#set: inchi key=InChIKey=KSFOVUSSGSKXFI-UJJXFSCMSA-L}}
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{{#set: molecular weight=560.651    }}
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{{#set: consumed by=RXN1F-20}}
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{{#set: produced by=PROTOPORGENOXI-RXN|PPPGO}}
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{{#set: reversible reaction associated=PROTOHEMEFERROCHELAT-RXN}}

Revision as of 14:44, 21 March 2018

Metabolite PROTOPORPHYRIN_IX

  • smiles:
    • C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=C4(C(CCC([O-])=O)=C(C)C(=CC3(C(C=C)=C(C)C(=CC=1N2)N=3))N4))=N5)))
  • common name:
    • protoporphyrin IX
  • inchi key:
    • InChIKey=KSFOVUSSGSKXFI-UJJXFSCMSA-L
  • molecular weight:
    • 560.651
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=C4(C(CCC([O-])=O)=C(C)C(=CC3(C(C=C)=C(C)C(=CC=1N2)N=3))N4))=N5)))" cannot be used as a page name in this wiki.