Difference between revisions of "4-AMINO-BUTYRATE"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2181 PWY-2181] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10782 RXN-10782] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2181 PWY-2181] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10782 RXN-10782] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** free phenylpropanoid acid biosynthesis
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** [http://enzyme.expasy.org/EC/2.8.2.1 EC-2.8.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[RXN-1104]]
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** 1 [[PAPS]][c] '''+''' 1 [[CPD-11671]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CPD-11674]][c] '''+''' 1 [[PROTON]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_18971]]
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** 1 3'-phosphoadenylyl-sulfate[c] '''+''' 1 5-hydroxytryptophol[c] '''=>''' 1 adenosine 3',5'-bisphosphate[c] '''+''' 1 5-hydroxytryptophol sulfate[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_18257]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_5505]]
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* [[RXN-1121]]
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** Source: [[orthology-esiliculosus]]
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** 5 associated gene(s):
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== Pathways  ==
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*** [[Tiso_gene_3577]]
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* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
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*** [[Tiso_gene_11183]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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*** [[Tiso_gene_1547]]
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== Reconstruction information  ==
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*** [[Tiso_gene_17028]]
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* Category: [[orthology]]
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*** [[Tiso_gene_8263]]
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** Source: [[orthology-esiliculosus]]
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** 2 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXN-3422]]
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** 2 associated gene(s):
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*** [[Tiso_gene_18257]]
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*** [[Tiso_gene_18971]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1103 RXN-1103]
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== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-2181 PWY-2181]
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{{#set: ec number=EC-2.8.2.1}}
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{{#set: taxonomic range=TAX-58024}}
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{{#set: gene associated=Tiso_gene_5505}}
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{{#set: common name=free phenylpropanoid acid biosynthesis}}
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{{#set: in pathway=PWY-6313}}
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{{#set: reaction found=3}}
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{{#set: reconstruction category=orthology}}
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{{#set: total reaction=4}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: completion rate=75.0}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 14:45, 21 March 2018

Reaction RXN-10782

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3'-phosphoadenylyl-sulfate[c] + 1 5-hydroxytryptophol[c] => 1 adenosine 3',5'-bisphosphate[c] + 1 5-hydroxytryptophol sulfate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6313, serotonin degradation: PWY-6313
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=4-AMINO-BUTYRATE&oldid=29952"