Difference between revisions of "DNA-With-Pyrimidine-Dimers"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6035 PWY-6035] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXINE-4-DEHYDROGENASE-RXN PYRIDOXINE-4-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE * comm...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6035 PWY-6035] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXINE-4-DEHYDROGENASE-RXN PYRIDOXINE-4-DEHYDROGENASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** REVERSIBLE
 
* common name:
 
* common name:
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** 2,3-cis-flavanols biosynthesis
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** aldo_keto_reductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.65 EC-1.1.1.65]
 
* Synonym(s):
 
* Synonym(s):
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** 2,3-cis-flavan-3-ols biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[RXN-9723]]
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** 1 [[NADP]][c] '''+''' 1 [[PYRIDOXINE]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL]][c] '''+''' 1 [[NADPH]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_15272]]
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** 1 NADP+[c] '''+''' 1 pyridoxine[c] '''<=>''' 1 H+[c] '''+''' 1 pyridoxal[c] '''+''' 1 NADPH[c]
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*** [[Tiso_gene_9504]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-9724]]
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* Gene: [[Tiso_gene_18748]]
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** 2 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_15272]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_9504]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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*** [[orthology-esiliculosus]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[RXN-9725]]
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* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
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** 3 associated gene(s):
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** '''6''' reactions found over '''9''' reactions in the full pathway
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*** [[Tiso_gene_9504]]
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== Reconstruction information  ==
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*** [[Tiso_gene_11016]]
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* Category: [[annotation]]
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*** [[Tiso_gene_15272]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33090}}
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* RHEA:
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{{#set: common name=2,3-cis-flavanols biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16129 16129]
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{{#set: common name=2,3-cis-flavan-3-ols biosynthesis}}
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* LIGAND-RXN:
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{{#set: reaction found=3}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01708 R01708]
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{{#set: total reaction=3}}
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* UNIPROT:
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/O14295 O14295]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=aldo_keto_reductase}}
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{{#set: ec number=EC-1.1.1.65}}
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{{#set: gene associated=Tiso_gene_18748}}
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{{#set: in pathway=PWY-7204|PWY-7282}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:46, 21 March 2018

Reaction PYRIDOXINE-4-DEHYDROGENASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • aldo_keto_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 pyridoxine[c] <=> 1 H+[c] + 1 pyridoxal[c] + 1 NADPH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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