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| Line 1: |
Line 1: |
| − | [[Category:Pathway]] | + | [[Category:Gene]] |
| − | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560] == | + | == Gene Tiso_gene_17244 == |
| − | * taxonomic range: | + | * right end position: |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5794 TAX-5794] | + | ** 3425 |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117] | + | * transcription direction: |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090] | + | ** POSITIVE |
| − | * common name: | + | * left end position: |
| − | ** methylerythritol phosphate pathway II | + | ** 2440 |
| | + | * centisome position: |
| | + | ** 63.69094 |
| | * Synonym(s): | | * Synonym(s): |
| − | ** nonmevalonate isopentenyl diphosphate biosynthesis
| |
| − | ** methylerythritol phosphate degradation
| |
| − | ** MEP degradation
| |
| − | ** deoxyxylulose phosphate pathway
| |
| − | ** DOXP pathway
| |
| − | ** Rohmer pathway
| |
| − | ** isopentenyl diphosphate biosynthesis -- mevalonate-independent
| |
| − | ** nonmevalonate isoprenoid pathway
| |
| − | ** MEP pathway
| |
| | | | |
| − | == Reaction(s) found == | + | == Reactions associated == |
| − | '''9''' reactions found over '''9''' reactions in the full pathway
| + | * Reaction: [[RXN-11598]] |
| − | * [[2.7.1.148-RXN]] | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ** 1 associated gene(s):
| + | *** Assignment: automated-name-match |
| − | *** [[Tiso_gene_13463]]
| + | ** Source: [[annotation-experimental_annotation]] |
| − | ** 7 reconstruction source(s) associated:
| + | *** Assignment: automated-name-match |
| − | *** [[annotation-experimental_annotation]]
| + | * Reaction: [[RXN-14177]] |
| − | *** [[orthology-esiliculosus]]
| + | ** Source: [[orthology-athaliana]] |
| − | *** [[annotation-in-silico_annotation]]
| + | == Pathways associated == |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[2.7.7.60-RXN]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_17568]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]] | + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[DXPREDISOM-RXN]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_15169]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]] | + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[DXS-RXN]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_17311]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]] | + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[IPPISOM-RXN]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_8653]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | * [[ISPH2-RXN]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_5609]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]] | + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | * [[RXN0-302]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_9642]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]] | + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[RXN0-882]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_15758]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[orthology-esiliculosus]] | + | |
| − | * [[RXN0-884]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_5609]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | == Reaction(s) not found == | + | |
| | == External links == | | == External links == |
| − | {{#set: taxonomic range=TAX-5794}} | + | {{#set: right end position=3425}} |
| − | {{#set: taxonomic range=TAX-1117}} | + | {{#set: transcription direction=POSITIVE}} |
| − | {{#set: taxonomic range=TAX-33090}} | + | {{#set: left end position=2440}} |
| − | {{#set: common name=methylerythritol phosphate pathway II}} | + | {{#set: centisome position=63.69094 }} |
| − | {{#set: common name=nonmevalonate isopentenyl diphosphate biosynthesis|methylerythritol phosphate degradation|MEP degradation|deoxyxylulose phosphate pathway|DOXP pathway|Rohmer pathway|isopentenyl diphosphate biosynthesis -- mevalonate-independent|nonmevalonate isoprenoid pathway|MEP pathway}} | + | {{#set: reaction associated=RXN-11598|RXN-14177}} |
| − | {{#set: reaction found=9}}
| + | |
| − | {{#set: total reaction=9}}
| + | |
| − | {{#set: completion rate=100.0}}
| + | |
