Difference between revisions of "RXN-4241"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-GULONATE L-GULONATE] == * smiles: ** C(O)C(O)C(O)C(O)C(O)C(=O)[O-] * inchi key: ** InChIKey=R...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETALD-DEHYDROG-RXN ACETALD-DEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** ORF * ec...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-GULONATE L-GULONATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETALD-DEHYDROG-RXN ACETALD-DEHYDROG-RXN] ==
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* smiles:
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* direction:
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** C(O)C(O)C(O)C(O)C(O)C(=O)[O-]
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** REVERSIBLE
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* inchi key:
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** InChIKey=RGHNJXZEOKUKBD-QTBDOELSSA-M
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* common name:
 
* common name:
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** L-gulonate
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** ORF
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* molecular weight:
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* ec number:
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** 195.149   
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** [http://enzyme.expasy.org/EC/1.2.1.10 EC-1.2.1.10]
 
* Synonym(s):
 
* Synonym(s):
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** gulonate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-8783]]
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** 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[ACETALD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ACETYL-COA]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
 +
** 1 coenzyme A[c] '''+''' 1 NAD+[c] '''+''' 1 acetaldehyde[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 acetyl-CoA[c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_7649]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_2052]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[PWY-5436]], L-threonine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5436 PWY-5436]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[ETOH-ACETYLCOA-ANA-PWY]], ethanol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ETOH-ACETYLCOA-ANA-PWY ETOH-ACETYLCOA-ANA-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7180]], 2'-deoxy-&alpha;-D-ribose 1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7180 PWY-7180]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5162]], 2-oxopentenoate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5162 PWY-5162]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7085]], triethylamine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7085 PWY-7085]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6587]], pyruvate fermentation to ethanol III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6587 PWY-6587]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PHOSPHONOTASE-PWY]], 2-aminoethylphosphonate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHONOTASE-PWY PHOSPHONOTASE-PWY]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[P161-PWY]], acetylene degradation: [http://metacyc.org/META/NEW-IMAGE?object=P161-PWY P161-PWY]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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** '''14''' reactions found over '''18''' reactions in the full pathway
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* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
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** '''5''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-5480]], pyruvate fermentation to ethanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5480 PWY-5480]
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** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
 +
** '''9''' reactions found over '''16''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6857680 6857680]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23288 23288]
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* CHEMSPIDER:
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* LIGAND-RXN:
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** [http://www.chemspider.com/Chemical-Structure.5257015.html 5257015]
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** [http://www.genome.jp/dbget-bin/www_bget?R00228 R00228]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=13115 13115]
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** [http://www.uniprot.org/uniprot/Q52434 Q52434]
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* METABOLIGHTS : MTBLC13115
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** [http://www.uniprot.org/uniprot/P0A9Q7 P0A9Q7]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P77580 P77580]
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** [http://www.genome.jp/dbget-bin/www_bget?C00800 C00800]
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** [http://www.uniprot.org/uniprot/P71866 P71866]
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{{#set: smiles=C(O)C(O)C(O)C(O)C(O)C(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/Q52060 Q52060]
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{{#set: inchi key=InChIKey=RGHNJXZEOKUKBD-QTBDOELSSA-M}}
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** [http://www.uniprot.org/uniprot/Q52016 Q52016]
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{{#set: common name=L-gulonate}}
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** [http://www.uniprot.org/uniprot/O85978 O85978]
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{{#set: molecular weight=195.149    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=gulonate}}
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{{#set: common name=ORF}}
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{{#set: produced by=RXN-8783}}
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{{#set: ec number=EC-1.2.1.10}}
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{{#set: gene associated=Tiso_gene_7649|Tiso_gene_2052}}
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{{#set: in pathway=PWY-5436|ETOH-ACETYLCOA-ANA-PWY|PWY-7180|PWY-5162|PWY-7085|PWY-6587|PHOSPHONOTASE-PWY|P161-PWY|P122-PWY|PWY4LZ-257|PWY-5480|FERMENTATION-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:47, 21 March 2018

Reaction ACETALD-DEHYDROG-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 NAD+[c] + 1 acetaldehyde[c] <=> 1 NADH[c] + 1 H+[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5436, L-threonine degradation IV: PWY-5436
    • 2 reactions found over 2 reactions in the full pathway
  • ETOH-ACETYLCOA-ANA-PWY, ethanol degradation I: ETOH-ACETYLCOA-ANA-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7180, 2'-deoxy-α-D-ribose 1-phosphate degradation: PWY-7180
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5162, 2-oxopentenoate degradation: PWY-5162
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7085, triethylamine degradation: PWY-7085
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6587, pyruvate fermentation to ethanol III: PWY-6587
    • 2 reactions found over 3 reactions in the full pathway
  • PHOSPHONOTASE-PWY, 2-aminoethylphosphonate degradation I: PHOSPHONOTASE-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • P161-PWY, acetylene degradation: P161-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 14 reactions found over 18 reactions in the full pathway
  • PWY4LZ-257, superpathway of fermentation (Chlamydomonas reinhardtii): PWY4LZ-257
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5480, pyruvate fermentation to ethanol I: PWY-5480
    • 2 reactions found over 3 reactions in the full pathway
  • FERMENTATION-PWY, mixed acid fermentation: FERMENTATION-PWY
    • 9 reactions found over 16 reactions in the full pathway

Reconstruction information

External links





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