Difference between revisions of "Cis-cis-D9-27-C46-2-ACPs"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920] == * common name: ** 6-gingerol analog biosynthesis (engineered) * Synonym(s): ==...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** diacylglycero...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** 6-gingerol analog biosynthesis (engineered)
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** diacylglycerol_kinase_catalytic_region
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** diacylglycerol_kinase
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** sphingosine_kinase_1
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.107 EC-2.7.1.107]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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** 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_12275]]
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** 1 a 1,2-diacyl-sn-glycerol[c] '''+''' 1 ATP[c] '''=>''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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*** [[Tiso_gene_14183]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14560]]
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* [[R223-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 9 associated gene(s):
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_348]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_136]]
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* Gene: [[Tiso_gene_1163]]
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*** [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_13394]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_500]]
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* Gene: [[Tiso_gene_1420]]
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*** [[Tiso_gene_7855]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_4191]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_135]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_9394]]
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== Pathways  ==
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** 3 reconstruction source(s) associated:
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* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
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*** [[annotation-experimental_annotation]]
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** '''7''' reactions found over '''16''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
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* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7039 PWY-7039]
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*** [[orthology-esiliculosus]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[RXN-12669]]
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== Reconstruction information  ==
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** 1 associated gene(s):
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* Category: [[orthology]]
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*** [[Tiso_gene_18566]]
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** Source: [[orthology-esiliculosus]]
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** 2 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[annotation-in-silico_annotation]]
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* Category: [[annotation]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-14275]]
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*** Tool: [[pathwaytools]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14027]]
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*** [[Tiso_gene_5857]]
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*** [[Tiso_gene_14026]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[RXN-14276]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_6885]]
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*** [[Tiso_gene_16145]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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−
== Reaction(s) not found ==
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−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12668 RXN-12668]
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== External links  ==
 
== External links  ==
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{{#set: common name=6-gingerol analog biosynthesis (engineered)}}
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* RHEA:
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{{#set: reaction found=5}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10272 10272]
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{{#set: total reaction=6}}
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* LIGAND-RXN:
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{{#set: completion rate=83.0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02240 R02240]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q01583 Q01583]
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** [http://www.uniprot.org/uniprot/P49621 P49621]
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** [http://www.uniprot.org/uniprot/P49619 P49619]
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** [http://www.uniprot.org/uniprot/P51556 P51556]
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** [http://www.uniprot.org/uniprot/Q9JTJ7 Q9JTJ7]
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** [http://www.uniprot.org/uniprot/Q9CGK9 Q9CGK9]
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** [http://www.uniprot.org/uniprot/Q9PIN8 Q9PIN8]
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** [http://www.uniprot.org/uniprot/O08560 O08560]
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** [http://www.uniprot.org/uniprot/P0ABN1 P0ABN1]
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** [http://www.uniprot.org/uniprot/P20192 P20192]
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** [http://www.uniprot.org/uniprot/P23743 P23743]
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** [http://www.uniprot.org/uniprot/Q06119 Q06119]
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** [http://www.uniprot.org/uniprot/Q03603 Q03603]
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** [http://www.uniprot.org/uniprot/Q39017 Q39017]
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** [http://www.uniprot.org/uniprot/Q09103 Q09103]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=diacylglycerol_kinase_catalytic_region}}
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{{#set: common name=diacylglycerol_kinase}}
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{{#set: common name=sphingosine_kinase_1}}
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{{#set: ec number=EC-2.7.1.107}}
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{{#set: gene associated=Tiso_gene_14560|Tiso_gene_1163|Tiso_gene_1420}}
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{{#set: in pathway=PWY-7817|PWY-7039}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:48, 21 March 2018

Reaction DIACYLGLYKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • diacylglycerol_kinase_catalytic_region
    • diacylglycerol_kinase
    • sphingosine_kinase_1
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a 1,2-diacyl-sn-glycerol[c] + 1 ATP[c] => 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus): PWY-7817
    • 7 reactions found over 16 reactions in the full pathway
  • PWY-7039, phosphatidate metabolism, as a signaling molecule: PWY-7039
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






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