Difference between revisions of "GLYCINE-SYN2-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5153 PWY-5153] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPONTPRO-RXN SPONTPRO-RXN] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * Wi...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5153 PWY-5153] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPONTPRO-RXN SPONTPRO-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
+
** REVERSIBLE
−
* common name:
+
−
** anthocyanin biosynthesis (delphinidin 3-O-glucoside)
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
  '''1''' reactions found over '''2''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN-7785]]
+
** 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''<=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_3330]]
+
** 1 H+[c] '''+''' 1 H2O[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''<=>''' 1 L-glutamate-5-semialdehyde[c]
−
** 1 reconstruction source(s) associated:
+
 
−
*** [[orthology-esiliculosus]]
+
== Genes associated with this reaction  ==
−
== Reaction(s) not found ==
+
== Pathways ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7815 RXN-7815]
+
* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6853]], ethylene biosynthesis II (microbes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6853 PWY-6853]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7770]], indolmycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7770 PWY-7770]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-58024}}
+
* RHEA:
−
{{#set: common name=anthocyanin biosynthesis (delphinidin 3-O-glucoside)}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28234 28234]
−
{{#set: reaction found=1}}
+
* LIGAND-RXN:
−
{{#set: total reaction=2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03314 R03314]
−
{{#set: completion rate=50.0}}
+
{{#set: direction=REVERSIBLE}}
 +
{{#set: in pathway=PWY-6922|PWY-6853|PWY-6344|PWY-3341|PROUT-PWY|ARG-PRO-PWY|PWY-7770|PWY-4981|PROSYN-PWY|CITRULBIO-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:48, 21 March 2018

Reaction SPONTPRO-RXN

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-6922, L-Nδ-acetylornithine biosynthesis: PWY-6922
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6853, ethylene biosynthesis II (microbes): PWY-6853
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6344, L-ornithine degradation II (Stickland reaction): PWY-6344
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-3341, L-proline biosynthesis III: PWY-3341
    • 5 reactions found over 5 reactions in the full pathway
  • PROUT-PWY, L-proline degradation: PROUT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway): ARG-PRO-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7770, indolmycin biosynthesis: PWY-7770
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-4981, L-proline biosynthesis II (from arginine): PWY-4981
    • 4 reactions found over 6 reactions in the full pathway
  • PROSYN-PWY, L-proline biosynthesis I: PROSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • CITRULBIO-PWY, L-citrulline biosynthesis: CITRULBIO-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLYCINE-SYN2-PWY&oldid=30394"