Difference between revisions of "PWY-6313"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY DETOX1-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TA...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY DETOX1-PWY] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
−
** superoxide radicals degradation
+
** UMP biosynthesis III
 
* Synonym(s):
 
* Synonym(s):
−
** removal of superoxide radicals
+
** uridine-5'-phosphate biosynthesis III
 +
** de novo biosynthesis of uridine-5'-phosphate III
 +
** de novo biosynthesis of uridine-5'-monophosphate III
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''2''' reactions found over '''2''' reactions in the full pathway
+
  '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[CATAL-RXN]]
+
* [[ASPCARBTRANS-RXN]]
−
** 8 associated gene(s):
+
** 1 associated gene(s):
−
*** [[Tiso_gene_11607]]
+
*** [[Tiso_gene_13527]]
−
*** [[Tiso_gene_4990]]
+
** 7 reconstruction source(s) associated:
−
*** [[Tiso_gene_3006]]
+
−
*** [[Tiso_gene_11916]]
+
−
*** [[Tiso_gene_19683]]
+
−
*** [[Tiso_gene_12499]]
+
−
*** [[Tiso_gene_5435]]
+
−
*** [[Tiso_gene_15923]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 
*** [[orthology-synechocystis]]
 
*** [[orthology-synechocystis]]
−
* [[SUPEROX-DISMUT-RXN]]
+
*** [[manual-primary_network]]
−
** 5 associated gene(s):
+
*** [[orthology-creinhardtii]]
−
*** [[Tiso_gene_3587]]
+
* [[CARBPSYN-RXN]]
−
*** [[Tiso_gene_15757]]
+
** 3 associated gene(s):
−
*** [[Tiso_gene_12651]]
+
*** [[Tiso_gene_4976]]
−
*** [[Tiso_gene_20023]]
+
*** [[Tiso_gene_4975]]
−
*** [[Tiso_gene_12652]]
+
*** [[Tiso_gene_4685]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[DIHYDROOROT-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_15379]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[OROPRIBTRANS-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_11163]]
 +
*** [[Tiso_gene_18647]]
 +
*** [[Tiso_gene_11164]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[OROTPDECARB-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_20050]]
 +
*** [[Tiso_gene_18647]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-synechocystis]]
 
*** [[orthology-synechocystis]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
 +
*** [[manual-primary_network]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=OROTATE-REDUCTASE-NADH-RXN OROTATE-REDUCTASE-NADH-RXN]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
{{#set: taxonomic range=TAX-201174}}
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=DETOX1-PWY DETOX1-PWY]
+
{{#set: taxonomic range=TAX-1239}}
−
* ARACYC:
+
{{#set: taxonomic range=TAX-2157}}
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=DETOX1-PWY DETOX1-PWY]
+
{{#set: common name=UMP biosynthesis III}}
−
{{#set: taxonomic range=TAX-2759}}
+
{{#set: common name=uridine-5'-phosphate biosynthesis III|de novo biosynthesis of uridine-5'-phosphate III|de novo biosynthesis of uridine-5'-monophosphate III}}
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: reaction found=5}}
−
{{#set: common name=superoxide radicals degradation}}
+
{{#set: total reaction=6}}
−
{{#set: common name=removal of superoxide radicals}}
+
{{#set: completion rate=83.0}}
−
{{#set: reaction found=2}}
+
−
{{#set: total reaction=2}}
+
−
{{#set: completion rate=100.0}}
+

Revision as of 14:49, 21 March 2018

Pathway PWY-7791

  • taxonomic range:
  • common name:
    • UMP biosynthesis III
  • Synonym(s):
    • uridine-5'-phosphate biosynthesis III
    • de novo biosynthesis of uridine-5'-phosphate III
    • de novo biosynthesis of uridine-5'-monophosphate III

Reaction(s) found

5 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6313&oldid=30410"