Difference between revisions of "CPD-1086"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17736 RXN-17736] == * direction: ** LEFT-TO-RIGHT * common name: ** abhydrolase_domain-containi...")
(Created page with "Category:Gene == Gene Tiso_gene_5234 == * right end position: ** 8420 * transcription direction: ** POSITIVE * left end position: ** 7053 * centisome position: ** 51.35804...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17736 RXN-17736] ==
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== Gene Tiso_gene_5234 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 8420
* common name:
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* transcription direction:
** abhydrolase_domain-containing_protein_4-like
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** POSITIVE
** ORF
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* left end position:
* ec number:
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** 7053
** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
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* centisome position:
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** 51.358044   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
** 1 [[PLASMENYLCHOLINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Long-Chain-Fatty-Acids]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-563]][c]
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* With common name(s):
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** 1 a plasmenylcholine[c] '''+''' 1 H2O[c] '''=>''' 1 a long-chain fatty acid[c] '''+''' 1 H+[c] '''+''' 1 a 1-(1-alkenyl)-sn-glycero-3-phosphocholine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15047]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12959]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15046]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12960]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7783]], plasmalogen degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7783 PWY-7783]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=8420}}
{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
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{{#set: transcription direction=POSITIVE}}
{{#set: common name=ORF}}
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{{#set: left end position=7053}}
{{#set: ec number=EC-3.1.1.4}}
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{{#set: centisome position=51.358044    }}
{{#set: gene associated=Tiso_gene_15047|Tiso_gene_12959|Tiso_gene_15046|Tiso_gene_12960}}
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
{{#set: in pathway=PWY-7783}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:49, 21 March 2018

Gene Tiso_gene_5234

  • right end position:
    • 8420
  • transcription direction:
    • POSITIVE
  • left end position:
    • 7053
  • centisome position:
    • 51.358044
  • Synonym(s):

Reactions associated

Pathways associated

External links