Difference between revisions of "PWY-7204"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_7350 == * left end position: ** 492 * transcription direction: ** NEGATIVE * right end position: ** 5446 * centisome position: ** 2.586071...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XLLG oligosaccha...") |
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Line 1: | Line 1: | ||
− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] == |
− | * | + | * direction: |
− | ** | + | ** LEFT-TO-RIGHT |
− | * | + | * common name: |
− | ** | + | ** xyloglucan XLLG oligosaccharide β-galactosidase |
− | * | + | ** glycoside_hydrolase |
− | ** | + | ** polyprotein |
− | * | + | * ec number: |
− | ** 2. | + | ** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23] |
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | ** | + | ** 1 [[CPD-13378]][c] '''+''' 2 [[WATER]][c] '''=>''' 2 [[D-galactopyranose]][c] '''+''' 1 [[CPD-13375]][c] |
− | *** | + | * With common name(s): |
− | ** | + | ** 1 XLLG xyloglucan oligosaccharide[c] '''+''' 2 H2O[c] '''=>''' 2 D-galactopyranose[c] '''+''' 1 XXXG xyloglucan oligosaccharide[c] |
− | ** | + | |
− | * [[ | + | == Genes associated with this reaction == |
− | ** in-silico_annotation | + | Genes have been associated with this reaction based on different elements listed below. |
− | *** | + | * Gene: [[Tiso_gene_1398]] |
− | ** | + | ** Source: [[annotation-in-silico_annotation]] |
− | *** | + | *** Assignment: EC-NUMBER |
− | == Pathways | + | ** Source: [[orthology-esiliculosus]] |
+ | * Gene: [[Tiso_gene_12839]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_17558]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | == Pathways == | ||
+ | * [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
− | {{#set: | + | {{#set: common name=xyloglucan XLLG oligosaccharide β-galactosidase}} |
− | {{#set: | + | {{#set: common name=glycoside_hydrolase}} |
− | {{#set: | + | {{#set: common name=polyprotein}} |
− | {{#set: | + | {{#set: ec number=EC-3.2.1.23}} |
+ | {{#set: gene associated=Tiso_gene_1398|Tiso_gene_12839|Tiso_gene_17558}} | ||
+ | {{#set: in pathway=PWY-6807}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 14:49, 21 March 2018
Contents
Reaction RXN-12400
- direction:
- LEFT-TO-RIGHT
- common name:
- xyloglucan XLLG oligosaccharide β-galactosidase
- glycoside_hydrolase
- polyprotein
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-13378[c] + 2 WATER[c] => 2 D-galactopyranose[c] + 1 CPD-13375[c]
- With common name(s):
- 1 XLLG xyloglucan oligosaccharide[c] + 2 H2O[c] => 2 D-galactopyranose[c] + 1 XXXG xyloglucan oligosaccharide[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_1398
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_12839
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_17558
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-6807, xyloglucan degradation II (exoglucanase): PWY-6807
- 3 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation