Difference between revisions of "RXN-16625"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URANA1t URANA1t] == * direction: ** REVERSIBLE * common name: ** Uracil:Na+ symporter, extracellula...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.31-RXN 1.2.1.31-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase *...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.31-RXN 1.2.1.31-RXN] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** polyketide_synthase |
| + | ** ORF | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.2.1.31 EC-1.2.1.31] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 | + | ** 1 [[WATER]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[ALLYSINE]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[CPD-468]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H2O[c] '''+''' 1 NAD(P)+[c] '''+''' 1 (S)-2-amino-6-oxohexanoate[c] '''=>''' 2 H+[c] '''+''' 1 L-2-aminoadipate[c] '''+''' 1 NAD(P)H[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_6563]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_5424]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_16719]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_5425]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_6562]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| + | * [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-DEG1-PWY LYSINE-DEG1-PWY] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * Category: [[ | + | * Category: [[annotation]] |
| − | ** Source: [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** Tool: [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
| − | {{#set: direction= | + | * RHEA: |
| − | {{#set: common name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12306 12306] |
| − | {{#set: gene associated= | + | * LIGAND-RXN: |
| − | {{#set: in pathway=}} | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03103 R03103] |
| − | {{#set: reconstruction category= | + | * UNIPROT: |
| − | {{#set: reconstruction source= | + | ** [http://www.uniprot.org/uniprot/P50113 P50113] |
| − | {{#set: reconstruction tool= | + | ** [http://www.uniprot.org/uniprot/P07702 P07702] |
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=polyketide_synthase}} | ||
| + | {{#set: common name=ORF}} | ||
| + | {{#set: ec number=EC-1.2.1.31}} | ||
| + | {{#set: gene associated=Tiso_gene_6563|Tiso_gene_5424|Tiso_gene_16719|Tiso_gene_5425|Tiso_gene_6562}} | ||
| + | {{#set: in pathway=LYSINE-DEG1-PWY}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Revision as of 14:49, 21 March 2018
Contents
Reaction 1.2.1.31-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- polyketide_synthase
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 NAD-P-OR-NOP[c] + 1 ALLYSINE[c] => 2 PROTON[c] + 1 CPD-468[c] + 1 NADH-P-OR-NOP[c]
- With common name(s):
- 1 H2O[c] + 1 NAD(P)+[c] + 1 (S)-2-amino-6-oxohexanoate[c] => 2 H+[c] + 1 L-2-aminoadipate[c] + 1 NAD(P)H[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_6563
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_5424
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_16719
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_5425
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_6562
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- LYSINE-DEG1-PWY, L-lysine degradation XI (mammalian): LYSINE-DEG1-PWY
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
