Difference between revisions of "Tiso gene 14227"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.6.14-RXN 3.1.6.14-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** n-acetylglucosamine-6...")
(Created page with "Category:Gene == Gene Tiso_gene_17215 == * right end position: ** 3672 * transcription direction: ** NEGATIVE * left end position: ** 2433 * centisome position: ** 63.2934...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.6.14-RXN 3.1.6.14-RXN] ==
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== Gene Tiso_gene_17215 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3672
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* common name:
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* transcription direction:
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** n-acetylglucosamine-6-sulfatase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.1.6.14 EC-3.1.6.14]
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** 2433
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* centisome position:
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** 63.293446   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-13039]]
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** 1 [[Heparan-NAc-Glc-6S]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Heparan-NAc-Glc]][c] '''+''' 1 [[SULFATE]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 [heparan sulfate]-α-N-acetyl-D-glucosamine 6-O-sulfate[c] '''+''' 1 H2O[c] '''=>''' 1 a [heparan]-N-acetyl-α-D-glucosamine[c] '''+''' 1 sulfate[c] '''+''' 1 H+[c]
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* Reaction: [[RXN-17127]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-8654]]
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* [[Tiso_gene_18170]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-8655]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: automated-name-match
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* Category: [[annotation]]
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* Reaction: [[RXN0-1141]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-5098]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6984]]
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* [[PWY0-522]]
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* [[PWY0-1275]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: right end position=3672}}
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** [http://www.uniprot.org/uniprot/P15586 P15586]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=2433}}
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{{#set: common name=n-acetylglucosamine-6-sulfatase}}
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{{#set: centisome position=63.293446    }}
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{{#set: ec number=EC-3.1.6.14}}
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{{#set: reaction associated=RXN-13039|RXN-17127|RXN-8654|RXN-8655|RXN0-1141|RXN0-5098}}
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{{#set: gene associated=Tiso_gene_18170}}
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{{#set: pathway associated=PWY-6984|PWY0-522|PWY0-1275}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:51, 21 March 2018

Gene Tiso_gene_17215

  • right end position:
    • 3672
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2433
  • centisome position:
    • 63.293446
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14227&oldid=30679"