Difference between revisions of "PRPP"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13064 RXN-13064] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13064 RXN-13064] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** TCA cycle VII (acetate-producers)
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** [http://enzyme.expasy.org/EC/1.14.14.1 EC-1.14.14.1]
 
* Synonym(s):
 
* Synonym(s):
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** tricarboxylic acid cycle
 
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** citric acid cycle
 
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** Krebs cycle
 
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** Szent-Gyorgyi-Krebs cycle
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[ACONITATEDEHYDR-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[CPD-9446]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[D-mannopyranose]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_13007]]
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** 1 oxygen[c] '''+''' 1 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 1,5-anhydro-D-mannitol[c] '''=>''' 1 H2O[c] '''+''' 1 an oxidized [NADPH-hemoprotein reductase][c] '''+''' 1 D-mannopyranose[c]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_1035]]
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* [[ACONITATEHYDR-RXN]]
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** Source: [[orthology-esiliculosus]]
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** 1 associated gene(s):
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== Pathways  ==
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*** [[Tiso_gene_13007]]
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* [[PWY-6992]], 1,5-anhydrofructose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6992 PWY-6992]
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** 2 reconstruction source(s) associated:
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** '''3''' reactions found over '''5''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** [[annotation-experimental_annotation]]
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* Category: [[orthology]]
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* [[CITSYN-RXN]]
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** Source: [[orthology-esiliculosus]]
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** 4 associated gene(s):
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_18030]]
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*** [[Tiso_gene_9601]]
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*** [[Tiso_gene_9603]]
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*** [[Tiso_gene_9602]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_6720]]
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*** [[Tiso_gene_3691]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[ISOCITDEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_18262]]
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*** [[Tiso_gene_10809]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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−
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTARATEDEH-RXN 2OXOGLUTARATEDEH-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-ACCEPTOR-RXN MALATE-DEHYDROGENASE-ACCEPTOR-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8807 RXN-8807]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=TCA cycle VII (acetate-producers)}}
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{{#set: ec number=EC-1.14.14.1}}
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{{#set: common name=tricarboxylic acid cycle|citric acid cycle|Krebs cycle|Szent-Gyorgyi-Krebs cycle}}
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{{#set: gene associated=Tiso_gene_1035}}
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{{#set: reaction found=5}}
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{{#set: in pathway=PWY-6992}}
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{{#set: total reaction=9}}
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{{#set: reconstruction category=orthology}}
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{{#set: completion rate=56.0}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 14:51, 21 March 2018

Reaction RXN-13064

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6992, 1,5-anhydrofructose degradation: PWY-6992
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PRPP&oldid=30699"