Difference between revisions of "ADENOSYLHOMOCYSCAT-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREDEHYD-RXN THREDEHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** threonine_mitochond...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14160 RXN-14160] == * direction: ** LEFT-TO-RIGHT * common name: ** glycerophosphorylethanolami...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREDEHYD-RXN THREDEHYD-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14160 RXN-14160] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** threonine_mitochondrial
+
** glycerophosphorylethanolamine phosphodiesterase
 
** ORF
 
** ORF
−
** serine_racemase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.3.1.19 EC-4.3.1.19]
+
** [http://enzyme.expasy.org/EC/3.1.4.46 EC-3.1.4.46]
 +
** [http://enzyme.expasy.org/EC/3.1.4.2 EC-3.1.4.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[THR]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-OXOBUTANOATE]][c]
+
** 1 [[L-1-GLYCEROPHOSPHORYLETHANOL-AMINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[ETHANOL-AMINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-threonine[c] '''=>''' 1 ammonium[c] '''+''' 1 2-oxobutanoate[c]
+
** 1 sn-glycero-3-phosphoethanolamine[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''+''' 1 ethanolamine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8525]]
+
* Gene: [[Tiso_gene_17232]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_5334]]
−
* [[Tiso_gene_12535]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_17207]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-428]], L-threonine degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-428 PWY66-428]
+
* [[PWY-7409]], phospholipid remodeling (phosphatidylethanolamine, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7409 PWY-7409]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22108 22108]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29320 29320]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R00996 R00996]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P25306 P25306]
+
−
** [http://www.uniprot.org/uniprot/Q04513 Q04513]
+
−
** [http://www.uniprot.org/uniprot/P37946 P37946]
+
−
** [http://www.uniprot.org/uniprot/Q9JZW1 Q9JZW1]
+
−
** [http://www.uniprot.org/uniprot/Q02145 Q02145]
+
−
** [http://www.uniprot.org/uniprot/P66897 P66897]
+
−
** [http://www.uniprot.org/uniprot/Q9WYJ1 Q9WYJ1]
+
−
** [http://www.uniprot.org/uniprot/Q9PP95 Q9PP95]
+
−
** [http://www.uniprot.org/uniprot/P25379 P25379]
+
−
** [http://www.uniprot.org/uniprot/P00927 P00927]
+
−
** [http://www.uniprot.org/uniprot/P20506 P20506]
+
−
** [http://www.uniprot.org/uniprot/P0AGF6 P0AGF6]
+
−
** [http://www.uniprot.org/uniprot/P04968 P04968]
+
−
** [http://www.uniprot.org/uniprot/P20132 P20132]
+
−
** [http://www.uniprot.org/uniprot/P09367 P09367]
+
−
** [http://www.uniprot.org/uniprot/Q9RWU8 Q9RWU8]
+
−
** [http://www.uniprot.org/uniprot/Q9JUX5 Q9JUX5]
+
−
** [http://www.uniprot.org/uniprot/Q9ZD93 Q9ZD93]
+
−
** [http://www.uniprot.org/uniprot/P31212 P31212]
+
−
** [http://www.uniprot.org/uniprot/P36007 P36007]
+
−
** [http://www.uniprot.org/uniprot/P73375 P73375]
+
−
** [http://www.uniprot.org/uniprot/Q9T0D1 Q9T0D1]
+
−
** [http://www.uniprot.org/uniprot/Q39469 Q39469]
+
−
** [http://www.uniprot.org/uniprot/Q93968 Q93968]
+
−
** [http://www.uniprot.org/uniprot/Q9XAA4 Q9XAA4]
+
−
** [http://www.uniprot.org/uniprot/O94634 O94634]
+
−
** [http://www.uniprot.org/uniprot/O59791 O59791]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=threonine_mitochondrial}}
+
{{#set: common name=glycerophosphorylethanolamine phosphodiesterase}}
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: common name=serine_racemase}}
+
{{#set: ec number=EC-3.1.4.46}}
−
{{#set: ec number=EC-4.3.1.19}}
+
{{#set: ec number=EC-3.1.4.2}}
−
{{#set: gene associated=Tiso_gene_8525|Tiso_gene_12535|Tiso_gene_17207}}
+
{{#set: gene associated=Tiso_gene_17232|Tiso_gene_5334}}
−
{{#set: in pathway=PWY66-428}}
+
{{#set: in pathway=PWY-7409}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:51, 21 March 2018

Reaction RXN-14160

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glycerophosphorylethanolamine phosphodiesterase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7409, phospholipid remodeling (phosphatidylethanolamine, yeast): PWY-7409
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links






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