Difference between revisions of "CPD-10262"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLOSUCCINATE-SYNTHASE-RXN ADENYLOSUCCINATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17927 RXN-17927] == * direction: ** LEFT-TO-RIGHT * common name: ** gtp-binding_protein * Synon...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLOSUCCINATE-SYNTHASE-RXN ADENYLOSUCCINATE-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17927 RXN-17927] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** adenylosuccinate_synthase
+
** gtp-binding_protein
−
** adenylosuccinate_synthetase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/6.3.4.4 EC-6.3.4.4]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[IMP]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[ADENYLOSUCC]][c]
+
** 1 [[3Prime-OH-Terminated-RNAs]][c] '''+''' 1 [[A-5-prime-PP-5-prime-RNA]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[RNAs]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 IMP[c] '''+''' 1 GTP[c] '''+''' 1 L-aspartate[c] '''=>''' 2 H+[c] '''+''' 1 phosphate[c] '''+''' 1 GDP[c] '''+''' 1 adenylo-succinate[c]
+
** 1 an [RNA]-3'-hydroxyl[c] '''+''' 1 a 5'-(5'-diphosphoadenosine)-(ribonucleoside)-[RNA][c] '''=>''' 1 AMP[c] '''+''' 1 a ribonucleic acid[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6453]]
+
* Gene: [[Tiso_gene_8396]]
−
** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: EC-NUMBER
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* [[Tiso_gene_743]]
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* Gene: [[Tiso_gene_8397]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
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*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[synechocystis]]
+
* Gene: [[Tiso_gene_8398]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15753 15753]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01135 R01135]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P29726 P29726]
 
−
** [http://www.uniprot.org/uniprot/P46664 P46664]
 
−
** [http://www.uniprot.org/uniprot/Q57981 Q57981]
 
−
** [http://www.uniprot.org/uniprot/P21900 P21900]
 
−
** [http://www.uniprot.org/uniprot/P0A7D4 P0A7D4]
 
−
** [http://www.uniprot.org/uniprot/P28650 P28650]
 
−
** [http://www.uniprot.org/uniprot/Q9JV25 Q9JV25]
 
−
** [http://www.uniprot.org/uniprot/P45283 P45283]
 
−
** [http://www.uniprot.org/uniprot/Q9PMG4 Q9PMG4]
 
−
** [http://www.uniprot.org/uniprot/Q9CE93 Q9CE93]
 
−
** [http://www.uniprot.org/uniprot/P52151 P52151]
 
−
** [http://www.uniprot.org/uniprot/P80210 P80210]
 
−
** [http://www.uniprot.org/uniprot/Q49087 Q49087]
 
−
** [http://www.uniprot.org/uniprot/O24578 O24578]
 
−
** [http://www.uniprot.org/uniprot/Q96529 Q96529]
 
−
** [http://www.uniprot.org/uniprot/O24396 O24396]
 
−
** [http://www.uniprot.org/uniprot/Q02787 Q02787]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=adenylosuccinate_synthase}}
+
{{#set: common name=gtp-binding_protein}}
−
{{#set: common name=adenylosuccinate_synthetase}}
+
{{#set: gene associated=Tiso_gene_8396|Tiso_gene_8397|Tiso_gene_8398}}
−
{{#set: ec number=EC-6.3.4.4}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Tiso_gene_6453|Tiso_gene_743}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: in pathway=PWY-7219}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 14:51, 21 March 2018

Reaction RXN-17927

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • gtp-binding_protein
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-10262&oldid=30715"