Difference between revisions of "RXN3DJ-11230"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
(Created page with "Category:Gene == Gene Tiso_gene_13305 == * right end position: ** 6380 * transcription direction: ** NEGATIVE * left end position: ** 3486 * centisome position: ** 54.5710...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041] ==
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== Gene Tiso_gene_13305 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** 6380
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* transcription direction:
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* common name:
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** NEGATIVE
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** S-adenosyl-L-methionine cycle II
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* left end position:
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** 3486
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* centisome position:
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** 54.571068   
 
* Synonym(s):
 
* Synonym(s):
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** activated methyl cycle
 
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** SAM cycle
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''4''' reactions found over '''4''' reactions in the full pathway
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* Reaction: [[3.2.1.21-RXN]]
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* [[ADENOSYLHOMOCYSTEINASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_14191]]
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** Source: [[annotation-experimental_annotation]]
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** 7 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[annotation-experimental_annotation]]
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* Reaction: [[RXN-10769]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** [[orthology-athaliana]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** Assignment: ec-number
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*** [[manual-primary_network]]
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* Reaction: [[RXN-10773]]
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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* [[HOMOCYSMET-RXN]]
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*** Assignment: ec-number
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** 1 associated gene(s):
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_1602]]
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*** Assignment: ec-number
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** 2 reconstruction source(s) associated:
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* Reaction: [[RXN-13602]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* [[RXN-7605]]
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** Source: [[annotation-experimental_annotation]]
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** 0 associated gene:
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*** Assignment: ec-number
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** 1 reconstruction source(s) associated:
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* Reaction: [[RXN-13603]]
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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* [[S-ADENMETSYN-RXN]]
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*** Assignment: ec-number
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** 1 associated gene(s):
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_13443]]
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*** Assignment: ec-number
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** 6 reconstruction source(s) associated:
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* Reaction: [[RXN-14179]]
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: ec-number
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*** [[orthology-athaliana]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** Assignment: ec-number
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*** [[manual-primary_network]]
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* Reaction: [[RXN-5341]]
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-8036]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9674]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-3121]]
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* [[PWY-6002]]
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* [[PWY-6788]]
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* [[PWY-5176]]
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* [[PWY-7092]]
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* [[PWY-7091]]
 
== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: right end position=6380}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5041 PWY-5041]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: left end position=3486}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: centisome position=54.571068    }}
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{{#set: common name=S-adenosyl-L-methionine cycle II}}
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{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
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{{#set: common name=activated methyl cycle|SAM cycle}}
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{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091}}
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{{#set: reaction found=4}}
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{{#set: total reaction=4}}
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{{#set: completion rate=100.0}}
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Revision as of 15:52, 21 March 2018

Gene Tiso_gene_13305

  • right end position:
    • 6380
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3486
  • centisome position:
    • 54.571068
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN3DJ-11230&oldid=30920"