Difference between revisions of "DAMPH"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5174 PWY-5174] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17919 RXN-17919] == * direction: ** LEFT-TO-RIGHT * common name: ** dna_ligase_mrna_capping_enz...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17919 RXN-17919] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** dna_ligase_mrna_capping_enzyme |
| + | ** dna_ligase | ||
| + | ** ORF | ||
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction | + | == Reaction Formula == |
| − | + | * With identifiers: | |
| − | * [[ | + | ** 1 [[3-Hydroxy-Terminated-DNAs]][c] '''+''' 1 [[A-5-prime-PP-5-prime-DNA]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[DNA-N]][c] |
| − | ** | + | * With common name(s): |
| − | *** [[ | + | ** 1 a [DNA]-3'-hydroxyl[c] '''+''' 1 a 5'-(5'-diphosphoadenosine)-[DNA][c] '''=>''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 DNAn[c] |
| − | ** | + | |
| − | *** [[ | + | == Genes associated with this reaction == |
| − | + | Genes have been associated with this reaction based on different elements listed below. | |
| − | * [ | + | * Gene: [[Tiso_gene_11251]] |
| − | * [ | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_14249]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_14250]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_3498]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_12142]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_6743]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: common name= | + | {{#set: common name=dna_ligase_mrna_capping_enzyme}} |
| − | {{#set: | + | {{#set: common name=dna_ligase}} |
| − | {{#set: | + | {{#set: common name=ORF}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_11251|Tiso_gene_14249|Tiso_gene_14250|Tiso_gene_3498|Tiso_gene_12142|Tiso_gene_6743}} |
| + | {{#set: in pathway=}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Revision as of 14:53, 21 March 2018
Contents
Reaction RXN-17919
- direction:
- LEFT-TO-RIGHT
- common name:
- dna_ligase_mrna_capping_enzyme
- dna_ligase
- ORF
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 3-Hydroxy-Terminated-DNAs[c] + 1 A-5-prime-PP-5-prime-DNA[c] => 1 PROTON[c] + 1 AMP[c] + 1 DNA-N[c]
- With common name(s):
- 1 a [DNA]-3'-hydroxyl[c] + 1 a 5'-(5'-diphosphoadenosine)-[DNA][c] => 1 H+[c] + 1 AMP[c] + 1 DNAn[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_11251
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14249
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14250
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_3498
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_12142
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_6743
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
