Difference between revisions of "RXN-12579"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,3,4-saturated f...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,3,4-saturated f...")
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== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10876]]
+
* Gene: [[Tiso_gene_136]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_136]]
+
* Gene: [[Tiso_gene_7855]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_4191]]
+
* Gene: [[Tiso_gene_9394]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_7855]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_10876]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_13394]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_4191]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_500]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_9394]]
+
* Gene: [[Tiso_gene_13394]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_500]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_348]]
+
* Gene: [[Tiso_gene_348]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_135]]
+
* Gene: [[Tiso_gene_135]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
Line 121: Line 121:
 
{{#set: ec number=EC-6.2.1.3}}
 
{{#set: ec number=EC-6.2.1.3}}
 
{{#set: common name=Acyl-activating enzyme|Fatty acid thiokinase (long-chain)}}
 
{{#set: common name=Acyl-activating enzyme|Fatty acid thiokinase (long-chain)}}
−
{{#set: gene associated=Tiso_gene_10876|Tiso_gene_136|Tiso_gene_4191|Tiso_gene_7855|Tiso_gene_13394|Tiso_gene_500|Tiso_gene_9394|Tiso_gene_348|Tiso_gene_135}}
+
{{#set: gene associated=Tiso_gene_136|Tiso_gene_7855|Tiso_gene_9394|Tiso_gene_10876|Tiso_gene_4191|Tiso_gene_13394|Tiso_gene_500|Tiso_gene_348|Tiso_gene_135}}
 
{{#set: in pathway=PWY-5136|PWY-7288|FAO-PWY|PWY66-391}}
 
{{#set: in pathway=PWY-5136|PWY-7288|FAO-PWY|PWY66-391}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:53, 21 March 2018

Reaction ACYLCOASYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2,3,4-saturated fatty acyl-CoA synthetase
    • polyketide_synthase
    • long_chain_acyl-_synthetase
    • acyl-_synthetase
    • ORF
  • ec number:
  • Synonym(s):
    • Acyl-activating enzyme
    • Fatty acid thiokinase (long-chain)

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a 2,3,4-saturated fatty acid[c] + 1 coenzyme A[c] + 1 ATP[c] => 1 diphosphate[c] + 1 AMP[c] + 1 a 2,3,4-saturated fatty acyl CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7288, fatty acid β-oxidation (peroxisome, yeast): PWY-7288
    • 3 reactions found over 5 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12579&oldid=31014"