Difference between revisions of "PWY-6607"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9725 RXN-9725] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P101-PWY P101-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9725 RXN-9725] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P101-PWY P101-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/1.3.1.77 EC-1.3.1.77]
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** ectoine biosynthesis
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''5''' reactions in the full pathway
** 1 [[CPD-591]][c] '''+''' 3 [[PROTON]][c] '''+''' 2 [[NADPH]][c] '''=>''' 2 [[NADP]][c] '''+''' 1 [[CPD-7630]][c]
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* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 cyanidin[c] '''+''' 3 H+[c] '''+''' 2 NADPH[c] '''=>''' 2 NADP+[c] '''+''' 1 (-)-epicatechin[c]
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*** [[Tiso_gene_18603]]
 
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** 7 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
* [[Tiso_gene_9504]]
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*** [[annotation-in-silico_annotation]]
** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-athaliana]]
* [[Tiso_gene_11016]]
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*** [[orthology-synechocystis]]
** [[pantograph]]-[[athaliana]]
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*** [[manual-primary_network]]
* [[Tiso_gene_15272]]
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*** [[orthology-creinhardtii]]
** [[pantograph]]-[[esiliculosus]]
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* [[ASPARTATEKIN-RXN]]
== Pathways  ==
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** 4 associated gene(s):
* [[PWY-6035]], 2,3-cis-flavanols biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6035 PWY-6035]
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*** [[Tiso_gene_4345]]
** '''3''' reactions found over '''3''' reactions in the full pathway
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*** [[Tiso_gene_17057]]
== Reconstruction information  ==
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*** [[Tiso_gene_13809]]
* Category: [[orthology]]
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*** [[Tiso_gene_16097]]
** Source: [[orthology-athaliana]]
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** 7 reconstruction source(s) associated:
*** Tool: [[pantograph]]
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*** [[annotation-experimental_annotation]]
** Source: [[orthology-esiliculosus]]
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*** [[orthology-esiliculosus]]
*** Tool: [[pantograph]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R101-RXN R101-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R102-RXN R102-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R103-RXN R103-RXN]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
** [http://www.genome.jp/dbget-bin/www_bget?R06542 R06542]
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{{#set: common name=ectoine biosynthesis}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=2}}
{{#set: ec number=EC-1.3.1.77}}
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{{#set: total reaction=5}}
{{#set: gene associated=Tiso_gene_9504|Tiso_gene_11016|Tiso_gene_15272}}
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{{#set: completion rate=40.0}}
{{#set: in pathway=PWY-6035}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 14:53, 21 March 2018

Pathway P101-PWY

  • taxonomic range:
  • common name:
    • ectoine biosynthesis
  • Synonym(s):

Reaction(s) found

2 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links