Difference between revisions of "HSCN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
 
* common name:
 
* common name:
−
** zeaxanthin, antheraxanthin and violaxanthin interconversion
+
** thiolase
 +
** acetyl-_c-acetyltransferase
 +
** 3-ketoacyl-_thiolase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
−
** xanthophyll cycle
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''4''' reactions found over '''4''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN-7978]]
+
** 1 [[CPD-15687]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-15688]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_10919]]
+
** 1 5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 3-cis, 5-trans-dodecadienoyl-CoA[c]
−
*** [[Tiso_gene_6386]]
+
 
−
** 3 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[annotation-in-silico_annotation]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[annotation-experimental_annotation]]
+
* Gene: [[Tiso_gene_10116]]
−
*** [[orthology-esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[RXN-7979]]
+
*** Assignment: EC-NUMBER
−
** 1 associated gene(s):
+
** Source: [[annotation-experimental_annotation]]
−
*** [[Tiso_gene_10919]]
+
*** Assignment: EC-NUMBER
−
** 1 reconstruction source(s) associated:
+
* Gene: [[Tiso_gene_3856]]
−
*** [[orthology-esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[RXN-7984]]
+
*** Assignment: EC-NUMBER
−
** 3 associated gene(s):
+
* Gene: [[Tiso_gene_15327]]
−
*** [[Tiso_gene_16523]]
+
** Source: [[annotation-experimental_annotation]]
−
*** [[Tiso_gene_1275]]
+
*** Assignment: EC-NUMBER
−
*** [[Tiso_gene_5666]]
+
* Gene: [[Tiso_gene_17451]]
−
** 2 reconstruction source(s) associated:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
−
*** [[orthology-esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[RXN-7985]]
+
*** Assignment: EC-NUMBER
−
** 3 associated gene(s):
+
* Gene: [[Tiso_gene_3855]]
−
*** [[Tiso_gene_5666]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_1275]]
+
*** Assignment: EC-NUMBER
−
*** [[Tiso_gene_16523]]
+
** Source: [[annotation-experimental_annotation]]
−
** 2 reconstruction source(s) associated:
+
*** Assignment: EC-NUMBER
−
*** [[annotation-in-silico_annotation]]
+
== Pathways  ==
−
*** [[orthology-esiliculosus]]
+
* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340]
−
== Reaction(s) not found ==
+
** '''3''' reactions found over '''10''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-4751}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: taxonomic range=TAX-2763}}
+
{{#set: common name=thiolase}}
−
{{#set: taxonomic range=TAX-1117}}
+
{{#set: common name=acetyl-_c-acetyltransferase}}
−
{{#set: taxonomic range=TAX-33090}}
+
{{#set: common name=3-ketoacyl-_thiolase}}
−
{{#set: common name=zeaxanthin, antheraxanthin and violaxanthin interconversion}}
+
{{#set: ec number=EC-2.3.1.16}}
−
{{#set: common name=xanthophyll cycle}}
+
{{#set: gene associated=Tiso_gene_10116|Tiso_gene_3856|Tiso_gene_15327|Tiso_gene_17451|Tiso_gene_3855}}
−
{{#set: reaction found=4}}
+
{{#set: in pathway=PWY-7340}}
−
{{#set: total reaction=4}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: completion rate=100.0}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:57, 21 March 2018

Reaction RXN-14799

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiolase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA[c] + 1 coenzyme A[c] => 1 acetyl-CoA[c] + 1 3-cis, 5-trans-dodecadienoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7340, 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): PWY-7340
    • 3 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=HSCN&oldid=31424"