Difference between revisions of "RXN1G-679"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object...")
(Created page with "Category:Gene == Gene Tiso_gene_17207 == * right end position: ** 2595 * transcription direction: ** POSITIVE * left end position: ** 959 * centisome position: ** 24.89615...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY] ==
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== Gene Tiso_gene_17207 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** 2595
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* common name:
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* transcription direction:
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** D-galacturonate degradation I
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** POSITIVE
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* left end position:
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** 959
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* centisome position:
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** 24.896158   
 
* Synonym(s):
 
* Synonym(s):
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** D-galacturonate catabolism
 
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** D-galacturonate degradation
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''2''' reactions found over '''5''' reactions in the full pathway
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* Reaction: [[5.1.1.16-RXN]]
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* [[GALACTUROISOM-RXN]]
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** Source: [[orthology-esiliculosus]]
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** 2 associated gene(s):
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* Reaction: [[5.1.1.18-RXN]]
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*** [[Tiso_gene_19097]]
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_8329]]
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* Reaction: [[RXN-15122]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* [[KDPGALDOL-RXN]]
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** Source: [[annotation-experimental_annotation]]
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** 1 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_12620]]
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* Reaction: [[RXN0-2381]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[orthology-esiliculosus]]
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* Reaction: [[RXN0-2382]]
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== Reaction(s) not found ==
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** Source: [[orthology-esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=ALTRO-OXIDOREDUCT-RXN ALTRO-OXIDOREDUCT-RXN]
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* Reaction: [[THREDEHYD-RXN]]
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* [http://metacyc.org/META/NEW-IMAGE?object=ALTRODEHYDRAT-RXN ALTRODEHYDRAT-RXN]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=DEOXYGLUCONOKIN-RXN DEOXYGLUCONOKIN-RXN]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[TRYPSYN-RXN]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[ILEUSYN-PWY]]
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* [[PWY-5437]]
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* [[PWY-6196]]
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* [[PWY66-428]]
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* [[PWY-5826]]
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* [[TRPSYN-PWY]]
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* [[PWY-6455]]
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* [[PWY-6949]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: right end position=2595}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY]
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: left end position=959}}
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{{#set: common name=D-galacturonate degradation I}}
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{{#set: centisome position=24.896158    }}
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{{#set: common name=D-galacturonate catabolism|D-galacturonate degradation}}
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{{#set: reaction associated=5.1.1.16-RXN|5.1.1.18-RXN|RXN-15122|RXN0-2381|RXN0-2382|THREDEHYD-RXN|TRYPSYN-RXN}}
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{{#set: reaction found=2}}
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{{#set: pathway associated=ILEUSYN-PWY|PWY-5437|PWY-6196|PWY66-428|PWY-5826|TRPSYN-PWY|PWY-6455|PWY-6949}}
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{{#set: total reaction=5}}
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{{#set: completion rate=40.0}}
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Revision as of 14:57, 21 March 2018

Gene Tiso_gene_17207

  • right end position:
    • 2595
  • transcription direction:
    • POSITIVE
  • left end position:
    • 959
  • centisome position:
    • 24.896158
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN1G-679&oldid=31432"