Difference between revisions of "PRO"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CELLULOSE-SYNTHASE-UDP-FORMING-RXN CELLULOSE-SYNTHASE-UDP-FORMING-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-508 RXN1G-508] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-lignoceroyl-[acyl-car...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CELLULOSE-SYNTHASE-UDP-FORMING-RXN CELLULOSE-SYNTHASE-UDP-FORMING-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-508 RXN1G-508] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** glycosyltransferase_family_2_protein
+
** 3-oxo-lignoceroyl-[acyl-carrier protein] reductase
 +
** 3-oxoacyl-(acyl-carrier-protein)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.12 EC-2.4.1.12]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CELLULOSE]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[CELLULOSE]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-oxo-lignoceroyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxylignoceroyl-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 cellulose[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 UDP[c] '''+''' 1 cellulose[c]
+
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a 3-oxo-lignoceroyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxylignoceroyl-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_322]]
+
* Gene: [[Tiso_gene_9885]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_6390]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_13083]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-1001]], cellulose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1001 PWY-1001]
+
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''86''' reactions found over '''182''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 32: Line 36:
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02889 R02889]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q59167 Q59167]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=glycosyltransferase_family_2_protein}}
+
{{#set: common name=3-oxo-lignoceroyl-[acyl-carrier protein] reductase}}
−
{{#set: ec number=EC-2.4.1.12}}
+
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
−
{{#set: gene associated=Tiso_gene_322|Tiso_gene_6390}}
+
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: in pathway=PWY-1001}}
+
{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13083}}
 +
{{#set: in pathway=PWYG-321}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:57, 21 March 2018

Reaction RXN1G-508

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-lignoceroyl-[acyl-carrier protein] reductase
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 86 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

"3-oxo-lignoceroyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.




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