Difference between revisions of "IS30-Insertion-Sequences"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACHMSSELCYSLh ACHMSSELCYSLh] == * direction: ** LEFT-TO-RIGHT * common name: ** O-Acetylhomoserine...")
(Created page with "Category:Gene == Gene Tiso_gene_14141 == * right end position: ** 1959 * transcription direction: ** POSITIVE * left end position: ** 1300 * centisome position: ** 22.3713...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACHMSSELCYSLh ACHMSSELCYSLh] ==
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== Gene Tiso_gene_14141 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1959
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* common name:
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* transcription direction:
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** O-Acetylhomoserine succinate-lyase (adding cysteine), chloroplast
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** POSITIVE
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* left end position:
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** 1300
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* centisome position:
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** 22.371365   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-10606]]
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** 1.0 [[L-SELENOCYSTEINE]][h] '''+''' 1.0 [[CPD-667]][h] '''=>''' 1.0 [[CPD-13717]][h] '''+''' 1.0 [[ACET]][h]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1.0 L-selenocysteine[h] '''+''' 1.0 O-acetyl-L-homoserine[h] '''=>''' 1.0 L-selenocystathionine[h] '''+''' 1.0 acetate[h]
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* Reaction: [[RXN-10607]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10608]]
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* [[Tiso_gene_3732]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-10609]]
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== Reconstruction information  ==
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** Source: [[annotation-in-silico_annotation]]
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* Category: [[orthology]]
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*** Assignment: ec-number
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[RXN-10616]]
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*** Tool: [[pantograph]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-10617]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-10618]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-10619]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-10784]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-11060]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13607]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13608]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14361]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9000]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-162]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-168]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-83]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[UDP-GLUCURONOSYLTRANSFERASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6261]]
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* [[PWY66-201]]
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* [[PWY-5756]]
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* [[PWY-6398]]
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* [[PWY-6313]]
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* [[PWY66-221]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1959}}
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{{#set: common name=O-Acetylhomoserine succinate-lyase (adding cysteine), chloroplast}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: gene associated=Tiso_gene_3732}}
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{{#set: left end position=1300}}
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{{#set: in pathway=}}
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{{#set: centisome position=22.371365    }}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=RXN-10606|RXN-10607|RXN-10608|RXN-10609|RXN-10616|RXN-10617|RXN-10618|RXN-10619|RXN-10784|RXN-11060|RXN-13607|RXN-13608|RXN-14361|RXN-9000|RXN66-162|RXN66-168|RXN66-83|UDP-GLUCURONOSYLTRANSFERASE-RXN}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: pathway associated=PWY-6261|PWY66-201|PWY-5756|PWY-6398|PWY-6313|PWY66-221}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 14:57, 21 March 2018

Gene Tiso_gene_14141

  • right end position:
    • 1959
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1300
  • centisome position:
    • 22.371365
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=IS30-Insertion-Sequences&oldid=31485"