Difference between revisions of "Tiso gene 1435"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYL-PP GERANYL-PP] == * smiles: ** CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C * inchi key...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN] == * direction: ** LEFT-TO...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYL-PP GERANYL-PP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN] ==
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* smiles:
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* direction:
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** CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=GVVPGTZRZFNKDS-JXMROGBWSA-K
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** [http://enzyme.expasy.org/EC/3.1.4.35 EC-3.1.4.35]
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* common name:
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** geranyl diphosphate
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* molecular weight:
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** 311.188   
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* Synonym(s):
 
* Synonym(s):
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** geranyl-diphosphate
 
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** geranyl-pyrophosphate
 
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** GPP
 
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** geranyl-PP
 
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** geranyl pyrophosphate
 
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** ω,E-geranyl diphosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[FPPSYN-RXN]]
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* With identifiers:
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* [[TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN]]
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** 1 [[CGMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[GPPS]]
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** 1 cyclic-GMP[c] '''+''' 1 H2O[c] '''=>''' 1 GMP[c] '''+''' 1 H+[c]
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== Reaction(s) of unknown directionality ==
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* [[GPPSYN-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9644]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_13785]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_12792]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* METABOLIGHTS : MTBLC58057
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16957 16957]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=19379894 19379894]
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* LIGAND-RXN:
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* KNAPSACK : C00000846
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** [http://www.genome.jp/dbget-bin/www_bget?R01234 R01234]
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* HMDB : HMDB01285
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P04972 P04972]
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** [http://www.genome.jp/dbget-bin/www_bget?C00341 C00341]
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** [http://www.uniprot.org/uniprot/P16586 P16586]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P23439 P23439]
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** [http://www.chemspider.com/Chemical-Structure.14211068.html 14211068]
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** [http://www.uniprot.org/uniprot/P35913 P35913]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P33726 P33726]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58057 58057]
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** [http://www.uniprot.org/uniprot/P09174 P09174]
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* BIGG : grdp
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** [http://www.uniprot.org/uniprot/P52731 P52731]
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{{#set: smiles=CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C}}
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** [http://www.uniprot.org/uniprot/P51160 P51160]
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{{#set: inchi key=InChIKey=GVVPGTZRZFNKDS-JXMROGBWSA-K}}
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** [http://www.uniprot.org/uniprot/P18545 P18545]
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{{#set: common name=geranyl diphosphate}}
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** [http://www.uniprot.org/uniprot/O76074 O76074]
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{{#set: molecular weight=311.188    }}
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** [http://www.uniprot.org/uniprot/P11541 P11541]
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{{#set: common name=geranyl-diphosphate|geranyl-pyrophosphate|GPP|geranyl-PP|geranyl pyrophosphate|ω,E-geranyl diphosphate}}
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** [http://www.uniprot.org/uniprot/P27664 P27664]
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{{#set: consumed by=FPPSYN-RXN|TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q62037 Q62037]
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{{#set: produced by=GPPS}}
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** [http://www.uniprot.org/uniprot/P23440 P23440]
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{{#set: reversible reaction associated=GPPSYN-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.1.4.35}}
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{{#set: gene associated=Tiso_gene_9644|Tiso_gene_13785|Tiso_gene_12792}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 14:58, 21 March 2018

Reaction 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 cyclic-GMP[c] + 1 H2O[c] => 1 GMP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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