Difference between revisions of "Tiso gene 1389"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10780 RXN-10780] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALCOHOL-DEHYDROG-RXN ALCOHOL-DEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** polyketi...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10780 RXN-10780] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALCOHOL-DEHYDROG-RXN ALCOHOL-DEHYDROG-RXN] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** polyketide_synthase
 +
** ORF
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''=>''' 1 [[5-HYDROXYINDOLE_ACETATE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[ETOH]][c] '''<=>''' 1 [[ACETALD]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 5-hydroxyindole acetaldehyde[c] '''=>''' 1 5-hydroxyindole acetate[c] '''+''' 2 H+[c] '''+''' 1 NADH[c]
+
** 1 NAD+[c] '''+''' 1 ethanol[c] '''<=>''' 1 acetaldehyde[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_7322]]
+
* Gene: [[Tiso_gene_18459]]
** [[pantograph]]-[[athaliana]]
+
** Source: [[orthology-synechocystis]]
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_7649]]
* [[Tiso_gene_3513]]
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** Source: [[annotation-in-silico_annotation]]
** [[pantograph]]-[[athaliana]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6563]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5424]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5425]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6562]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
+
* [[PWY66-21]], ethanol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-21 PWY66-21]
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[ETOH-ACETYLCOA-ANA-PWY]], ethanol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ETOH-ACETYLCOA-ANA-PWY ETOH-ACETYLCOA-ANA-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
 +
** '''9''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-6333]], acetaldehyde biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6333 PWY-6333]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5486]], pyruvate fermentation to ethanol II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5486 PWY-5486]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[P161-PWY]], acetylene degradation: [http://metacyc.org/META/NEW-IMAGE?object=P161-PWY P161-PWY]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 +
** '''14''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5480]], pyruvate fermentation to ethanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5480 PWY-5480]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6587]], pyruvate fermentation to ethanol III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6587 PWY-6587]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
** Source: [[orthology-athaliana]]
+
** Source: [[orthology-synechocystis]]
*** Tool: [[pantograph]]
+
** Source: [[orthology-esiliculosus]]
+
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31215 31215]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25290 25290]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R04903 R04903]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00754 R00754]
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
{{#set: ec number=EC-1.2.1.3}}
+
{{#set: common name=polyketide_synthase}}
{{#set: gene associated=Tiso_gene_7322|Tiso_gene_3513}}
+
{{#set: common name=ORF}}
{{#set: in pathway=PWY-6313}}
+
{{#set: ec number=EC-1.1.1.1}}
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_18459|Tiso_gene_7649|Tiso_gene_6563|Tiso_gene_5424|Tiso_gene_5425|Tiso_gene_6562}}
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
+
{{#set: in pathway=PWY66-21|ETOH-ACETYLCOA-ANA-PWY|PWY-7118|FERMENTATION-PWY|PWY-6333|PWY-5486|P161-PWY|P122-PWY|PWY4LZ-257|PWY-5480|PWY-6587}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-synechocystis}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:59, 21 March 2018

Reaction ALCOHOL-DEHYDROG-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 ethanol[c] <=> 1 acetaldehyde[c] + 1 NADH[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-21, ethanol degradation II: PWY66-21
    • 3 reactions found over 3 reactions in the full pathway
  • ETOH-ACETYLCOA-ANA-PWY, ethanol degradation I: ETOH-ACETYLCOA-ANA-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7118, chitin degradation to ethanol: PWY-7118
    • 4 reactions found over 6 reactions in the full pathway
  • FERMENTATION-PWY, mixed acid fermentation: FERMENTATION-PWY
    • 9 reactions found over 16 reactions in the full pathway
  • PWY-6333, acetaldehyde biosynthesis I: PWY-6333
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5486, pyruvate fermentation to ethanol II: PWY-5486
    • 1 reactions found over 2 reactions in the full pathway
  • P161-PWY, acetylene degradation: P161-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 14 reactions found over 18 reactions in the full pathway
  • PWY4LZ-257, superpathway of fermentation (Chlamydomonas reinhardtii): PWY4LZ-257
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5480, pyruvate fermentation to ethanol I: PWY-5480
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6587, pyruvate fermentation to ethanol III: PWY-6587
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links