Difference between revisions of "L-PHOSPHATIDATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-BASE-RXN 3-OXOACYL-ACP-SYNTH-BASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNNH DNNH] == * direction: ** LEFT-TO-RIGHT * common name: ** deamino-NAD+ nucleotidohydrolase * Sy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-BASE-RXN 3-OXOACYL-ACP-SYNTH-BASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNNH DNNH] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** 3-oxoacyl-synthase
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** deamino-NAD+ nucleotidohydrolase
** polyketide_synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ACETYL-ACP]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[Acetoacetyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** 1.0 [[DEAMIDO-NAD]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[AMP]][c] '''+''' 1.0 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 2.0 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 an acetyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 an acetoacetyl-[acp][c] '''+''' 1 CO2[c]
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** 1.0 nicotinate adenine dinucleotide[c] '''+''' 1.0 H2O[c] '''=>''' 1.0 AMP[c] '''+''' 1.0 β-nicotinate D-ribonucleotide[c] '''+''' 2.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_10876]]
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* Gene: [[Tiso_gene_9180]]
** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
***EC-NUMBER
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* Gene: [[Tiso_gene_7189]]
* [[Tiso_gene_5939]]
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** Source: [[orthology-creinhardtii]]
** IN-SILICO_ANNOTATION
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* Gene: [[Tiso_gene_2918]]
***EC-NUMBER
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** Source: [[orthology-creinhardtii]]
** EXPERIMENTAL_ANNOTATION
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* Gene: [[Tiso_gene_2747]]
***EC-NUMBER
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** Source: [[orthology-creinhardtii]]
* [[Tiso_gene_14485]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15991]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19302]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5965]], fatty acid biosynthesis initiation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5965 PWY-5965]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-5966]], fatty acid biosynthesis initiation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5966 PWY-5966]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[FASYN-INITIAL-PWY]], superpathway of fatty acid biosynthesis initiation (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY]
 
** '''5''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
** Source: [[orthology-athaliana]]
+
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
** Source: [[orthology-synechocystis]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
* Category: [[manual]]
 
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P23902 P23902]
 
** [http://www.uniprot.org/uniprot/P0A6R0 P0A6R0]
 
** [http://www.uniprot.org/uniprot/P49327 P49327]
 
** [http://www.uniprot.org/uniprot/P43710 P43710]
 
** [http://www.uniprot.org/uniprot/Q9HYR2 Q9HYR2]
 
** [http://www.uniprot.org/uniprot/O67612 O67612]
 
** [http://www.uniprot.org/uniprot/P20582 P20582]
 
** [http://www.uniprot.org/uniprot/Q9JT63 Q9JT63]
 
** [http://www.uniprot.org/uniprot/Q9JW56 Q9JW56]
 
** [http://www.uniprot.org/uniprot/Q9PMZ6 Q9PMZ6]
 
** [http://www.uniprot.org/uniprot/P43711 P43711]
 
** [http://www.uniprot.org/uniprot/O25284 O25284]
 
** [http://www.uniprot.org/uniprot/Q9JX65 Q9JX65]
 
** [http://www.uniprot.org/uniprot/O34340 O34340]
 
** [http://www.uniprot.org/uniprot/Q9PI63 Q9PI63]
 
** [http://www.uniprot.org/uniprot/P0AAI5 P0AAI5]
 
** [http://www.uniprot.org/uniprot/Q07510 Q07510]
 
** [http://www.uniprot.org/uniprot/Q06097 Q06097]
 
** [http://www.uniprot.org/uniprot/P41175 P41175]
 
** [http://www.uniprot.org/uniprot/P31176 P31176]
 
** [http://www.uniprot.org/uniprot/Q40027 Q40027]
 
** [http://www.uniprot.org/uniprot/Q40028 Q40028]
 
** [http://www.uniprot.org/uniprot/P73283 P73283]
 
** [http://www.uniprot.org/uniprot/P0A953 P0A953]
 
** [http://www.uniprot.org/uniprot/O64485 O64485]
 
** [http://www.uniprot.org/uniprot/O65677 O65677]
 
** [http://www.uniprot.org/uniprot/Q39310 Q39310]
 
** [http://www.uniprot.org/uniprot/O23738 O23738]
 
** [http://www.uniprot.org/uniprot/Q41134 Q41134]
 
** [http://www.uniprot.org/uniprot/Q41135 Q41135]
 
** [http://www.uniprot.org/uniprot/Q54208 Q54208]
 
** [http://www.uniprot.org/uniprot/O54440 O54440]
 
** [http://www.uniprot.org/uniprot/P55338 P55338]
 
** [http://www.uniprot.org/uniprot/Q9RA31 Q9RA31]
 
** [http://www.uniprot.org/uniprot/P12276 P12276]
 
** [http://www.uniprot.org/uniprot/P12785 P12785]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=3-oxoacyl-synthase}}
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{{#set: common name=deamino-NAD+ nucleotidohydrolase}}
{{#set: common name=polyketide_synthase}}
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{{#set: gene associated=Tiso_gene_9180|Tiso_gene_7189|Tiso_gene_2918|Tiso_gene_2747}}
{{#set: ec number=EC-2.3.1.86}}
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{{#set: in pathway=}}
{{#set: ec number=EC-2.3.1.85}}
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{{#set: reconstruction category=orthology}}
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
{{#set: gene associated=Tiso_gene_10876|Tiso_gene_5939|Tiso_gene_14485|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_136|Tiso_gene_15991|Tiso_gene_135|Tiso_gene_19302}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: in pathway=PWY-5965|PWY-5966|FASYN-INITIAL-PWY|PWY-7388}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 15:01, 21 March 2018

Reaction DNNH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • deamino-NAD+ nucleotidohydrolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 nicotinate adenine dinucleotide[c] + 1.0 H2O[c] => 1.0 AMP[c] + 1.0 β-nicotinate D-ribonucleotide[c] + 2.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links