Difference between revisions of "RXN-14271"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10139 CPD-10139] == * smiles: ** C=C(C1(CCC2(C(C1)O2)(C)))C * inchi key: ** InChIKey=CCEFMU...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.78-RXN 3.2.1.78-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** endo-beta-_-mannanase...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10139 CPD-10139] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.78-RXN 3.2.1.78-RXN] ==
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* smiles:
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* direction:
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** C=C(C1(CCC2(C(C1)O2)(C)))C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=CCEFMUBVSUDRLG-MGRQHWMJSA-N
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* common name:
 
* common name:
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** (+)-(1S,4R)-limonene-1,2- epoxide
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** endo-beta-_-mannanase
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* molecular weight:
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* ec number:
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** 152.236   
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** [http://enzyme.expasy.org/EC/3.2.1.78 EC-3.2.1.78]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[1-4-Mannan]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[Short-Mannan]][c]
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* [[RXN-9464]]
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* With common name(s):
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** 1 a β-(1,4)-D-mannan[c] '''+''' 1 H2O[c] '''=>''' 2 a β-(1,4)-mannan oligosaccharide[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_8816]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7456]], β-(1,4)-mannan degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7456 PWY-7456]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=12382524 12382524]
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** [http://www.uniprot.org/uniprot/P16699 P16699]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P22533 P22533]
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** [http://www.genome.jp/dbget-bin/www_bget?C07271 C07271]
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** [http://www.uniprot.org/uniprot/O66185 O66185]
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* HMDB : HMDB35158
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** [http://www.uniprot.org/uniprot/O48540 O48540]
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{{#set: smiles=C=C(C1(CCC2(C(C1)O2)(C)))C}}
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** [http://www.uniprot.org/uniprot/Q9M0H6 Q9M0H6]
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{{#set: inchi key=InChIKey=CCEFMUBVSUDRLG-MGRQHWMJSA-N}}
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** [http://www.uniprot.org/uniprot/P49425 P49425]
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{{#set: common name=(+)-(1S,4R)-limonene-1,2- epoxide}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: molecular weight=152.236    }}
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{{#set: common name=endo-beta-_-mannanase}}
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{{#set: reversible reaction associated=RXN-9464}}
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{{#set: ec number=EC-3.2.1.78}}
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{{#set: gene associated=Tiso_gene_8816}}
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{{#set: in pathway=PWY-7456}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:01, 21 March 2018

Reaction 3.2.1.78-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • endo-beta-_-mannanase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a β-(1,4)-D-mannan[c] + 1 H2O[c] => 2 a β-(1,4)-mannan oligosaccharide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7456, β-(1,4)-mannan degradation: PWY-7456
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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