Difference between revisions of "PWY-1722"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUDP DUDP] == * smiles: ** C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2)) * i...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5822 RXN-5822] == * direction: ** LEFT-TO-RIGHT * common name: ** purple_acid_phosphatase-like_...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUDP DUDP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5822 RXN-5822] ==
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* smiles:
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* direction:
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** C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=QHWZTVCCBMIIKE-SHYZEUOFSA-K
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* common name:
 
* common name:
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** dUDP
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** purple_acid_phosphatase-like_protein
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* molecular weight:
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** alkaline_phosphatase_d
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** 385.14   
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** acid_phosphatase
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** ORF
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** alkaline_phosphatase
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** histidine_acid_phosphatase_domain_containing_2a
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.2 EC-3.1.3.2]
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** [http://enzyme.expasy.org/EC/3.1.3.1 EC-3.1.3.1]
 
* Synonym(s):
 
* Synonym(s):
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** 2'-deoxyuridine-5'-diphosphate
 
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** deoxyuridine-diphosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-14220]]
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* With identifiers:
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* [[ATDUDm]]
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** 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[NAD]][c]
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* [[ATDUD]]
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* With common name(s):
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* [[DUDPKIN-RXN]]
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** 1 NADP+[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 NAD+[c]
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== Reaction(s) known to produce the compound ==
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* [[RXN0-722]]
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== Genes associated with this reaction  ==
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* [[RXN-14219]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[UDPREDUCT-RXN]]
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* Gene: [[Tiso_gene_9372]]
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* [[DUTUP]]
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** Source: [[annotation-in-silico_annotation]]
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* [[DUTCP]]
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*** Assignment: EC-NUMBER
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== Reaction(s) of unknown directionality ==
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* Gene: [[Tiso_gene_17309]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_15256]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3271]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_8159]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10738]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5996]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17310]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5083]], NAD/NADH phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[NADPHOS-DEPHOS-PWY]], NAD phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=NADPHOS-DEPHOS-PWY NADPHOS-DEPHOS-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III: [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* BIGG : dudp
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28050 28050]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25246037 25246037]
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* LIGAND-RXN:
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* HMDB : HMDB01000
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** [http://www.genome.jp/dbget-bin/www_bget?R00118 R00118]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01346 C01346]
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{{#set: common name=purple_acid_phosphatase-like_protein}}
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* CHEBI:
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{{#set: common name=alkaline_phosphatase_d}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=60471 60471]
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{{#set: common name=acid_phosphatase}}
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* METABOLIGHTS : MTBLC60471
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{{#set: common name=ORF}}
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{{#set: smiles=C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))}}
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{{#set: common name=alkaline_phosphatase}}
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{{#set: inchi key=InChIKey=QHWZTVCCBMIIKE-SHYZEUOFSA-K}}
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{{#set: common name=histidine_acid_phosphatase_domain_containing_2a}}
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{{#set: common name=dUDP}}
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{{#set: ec number=EC-3.1.3.2}}
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{{#set: molecular weight=385.14    }}
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{{#set: ec number=EC-3.1.3.1}}
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{{#set: common name=2'-deoxyuridine-5'-diphosphate|deoxyuridine-diphosphate}}
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{{#set: gene associated=Tiso_gene_9372|Tiso_gene_17309|Tiso_gene_15256|Tiso_gene_3271|Tiso_gene_8159|Tiso_gene_10738|Tiso_gene_5996|Tiso_gene_17310}}
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{{#set: consumed by=RXN-14220|ATDUDm|ATDUD|DUDPKIN-RXN}}
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{{#set: in pathway=PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
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{{#set: produced by=RXN0-722|RXN-14219|UDPREDUCT-RXN|DUTUP|DUTCP}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:02, 21 March 2018

Reaction RXN-5822

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • purple_acid_phosphatase-like_protein
    • alkaline_phosphatase_d
    • acid_phosphatase
    • ORF
    • alkaline_phosphatase
    • histidine_acid_phosphatase_domain_containing_2a
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 H2O[c] => 1 phosphate[c] + 1 NAD+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links








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