Difference between revisions of "Tiso gene 13604"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2...")
(Created page with "Category:Gene == Gene Tiso_gene_10066 == * right end position: ** 1714 * transcription direction: ** POSITIVE * left end position: ** 496 * centisome position: ** 2.521478...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY] ==
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== Gene Tiso_gene_10066 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** 1714
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* transcription direction:
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* common name:
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** POSITIVE
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** sulfate reduction II (assimilatory)
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* left end position:
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** 496
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* centisome position:
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** 2.5214784   
 
* Synonym(s):
 
* Synonym(s):
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** sulfur metabolism
 
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** sulfur assimilation
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''3''' reactions found over '''3''' reactions in the full pathway
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* Reaction: [[1.11.1.15-RXN]]
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* [[1.8.4.9-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 0 associated gene:
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*** Assignment: ec-number
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** 1 reconstruction source(s) associated:
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* Reaction: [[3-OXOADIPATE-ENOL-LACTONASE-RXN]]
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*** [[manual-primary_network]]
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** Source: [[annotation-in-silico_annotation]]
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* [[SULFATE-ADENYLYLTRANS-RXN]]
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*** Assignment: ec-number
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** 2 associated gene(s):
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* Reaction: [[3.1.1.64-RXN]]
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*** [[Tiso_gene_10254]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_17879]]
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*** Assignment: ec-number
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** 5 reconstruction source(s) associated:
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* Reaction: [[CARBOXYLESTERASE-RXN]]
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*** [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** [[orthology-synechocystis]]
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* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** Assignment: ec-number
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* [[SULFITE-REDUCTASE-FERREDOXIN-RXN]]
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* Reaction: [[RXN-10083]]
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** 1 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_10247]]
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*** Assignment: ec-number
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** 3 reconstruction source(s) associated:
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* Reaction: [[RXN-10711]]
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*** [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** Assignment: ec-number
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*** [[orthology-esiliculosus]]
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* Reaction: [[RXN-10767]]
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== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12252]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12575]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-5468]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXNQT-4366]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY]]
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* [[CATECHOL-ORTHO-CLEAVAGE-PWY]]
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* [[PWY-6185]]
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* [[PWY-6857]]
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* [[PWY-6303]]
 
== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: right end position=1714}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY]
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: left end position=496}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: centisome position=2.5214784    }}
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{{#set: common name=sulfate reduction II (assimilatory)}}
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{{#set: reaction associated=1.11.1.15-RXN|3-OXOADIPATE-ENOL-LACTONASE-RXN|3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10083|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXN0-5468|RXNQT-4366}}
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{{#set: common name=sulfur metabolism|sulfur assimilation}}
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{{#set: pathway associated=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY|CATECHOL-ORTHO-CLEAVAGE-PWY|PWY-6185|PWY-6857|PWY-6303}}
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{{#set: reaction found=3}}
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{{#set: total reaction=3}}
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{{#set: completion rate=100.0}}
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Revision as of 16:02, 21 March 2018

Gene Tiso_gene_10066

  • right end position:
    • 1714
  • transcription direction:
    • POSITIVE
  • left end position:
    • 496
  • centisome position:
    • 2.5214784
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13604&oldid=31952"