Difference between revisions of "PWY-5076"

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(Created page with "Category:Gene == Gene Tiso_gene_8396 == * left end position: ** 1088 * transcription direction: ** NEGATIVE * right end position: ** 5351 * centisome position: ** 10.56926...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object...")
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_8396 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY] ==
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* left end position:
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* taxonomic range:
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** 1088
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** NEGATIVE
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* common name:
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* right end position:
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** mixed acid fermentation
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** 5351
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* centisome position:
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** 10.569264   
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* Synonym(s):
 
* Synonym(s):
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** fermentation
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[RNA-LIGASE-ATP-RXN]]
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'''9''' reactions found over '''16''' reactions in the full pathway
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** in-silico_annotation
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* [[ACETALD-DEHYDROG-RXN]]
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***ec-number
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** 2 associated gene(s):
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* [[RXN-17925]]
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*** [[Tiso_gene_7649]]
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** in-silico_annotation
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*** [[Tiso_gene_2052]]
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***ec-number
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** 2 reconstruction source(s) associated:
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* [[RXN-17926]]
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*** [[annotation-in-silico_annotation]]
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** in-silico_annotation
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*** [[orthology-creinhardtii]]
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***ec-number
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* [[ACONITATEDEHYDR-RXN]]
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* [[RXN-17927]]
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** 1 associated gene(s):
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** in-silico_annotation
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*** [[Tiso_gene_13007]]
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***ec-number
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** 3 reconstruction source(s) associated:
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== Pathways associated ==
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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* [[ACONITATEHYDR-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_13007]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[ALCOHOL-DEHYDROG-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_18459]]
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*** [[Tiso_gene_7649]]
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*** [[Tiso_gene_6563]]
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*** [[Tiso_gene_5424]]
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*** [[Tiso_gene_5425]]
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*** [[Tiso_gene_6562]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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* [[CITSYN-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_18030]]
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*** [[Tiso_gene_9601]]
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*** [[Tiso_gene_9603]]
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*** [[Tiso_gene_9602]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_3691]]
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*** [[Tiso_gene_6720]]
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** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[ISOCITDEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_18262]]
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*** [[Tiso_gene_10809]]
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** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_2323]]
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*** [[Tiso_gene_1990]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PEPDEPHOS-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_18206]]
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*** [[Tiso_gene_14504]]
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*** [[Tiso_gene_974]]
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*** [[Tiso_gene_14505]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=FHLMULTI-RXN FHLMULTI-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PHOSACETYLTRANS-RXN PHOSACETYLTRANS-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUVFORMLY-RXN PYRUVFORMLY-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1088}}
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* ECOCYC:
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{{#set: transcription direction=NEGATIVE}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
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{{#set: right end position=5351}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: centisome position=10.569264    }}
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{{#set: taxonomic range=TAX-2}}
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{{#set: reaction associated=RNA-LIGASE-ATP-RXN|RXN-17925|RXN-17926|RXN-17927}}
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{{#set: common name=mixed acid fermentation}}
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{{#set: common name=fermentation}}
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{{#set: reaction found=9}}
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{{#set: total reaction=16}}
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{{#set: completion rate=56.0}}

Revision as of 15:03, 21 March 2018

Pathway FERMENTATION-PWY

  • taxonomic range:
  • common name:
    • mixed acid fermentation
  • Synonym(s):
    • fermentation

Reaction(s) found

9 reactions found over 16 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5076&oldid=32028"